Homologs in group_3857

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1 homologs were identified in 1 genome with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
F4V73_RS15330 F4V73_RS15330 41.5 Morganella psychrotolerans - type II toxin-antitoxin system RelE/ParE family toxin

Distribution of the homologs in the orthogroup group_3857

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3857

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q9KMA6 7.63e-19 78 40 1 105 1 higB-2 Toxin HigB-2 Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS02720
Feature type CDS
Gene -
Product type II toxin-antitoxin system RelE/ParE family toxin
Location 592933 - 593265 (strand: 1)
Length 333 (nucleotides) / 110 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_3857
Orthogroup size 2
N. genomes 2

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Genomic region

Domains

PF06296 RelE toxin of RelE / RelB toxin-antitoxin system

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG4737 Function unknown (S) S Uncharacterized conserved protein

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K07726 putative transcriptional regulator - -

Protein Sequence

MSHAIEFIETSIFTQQIKLLATDKEIRILQNELISKPDKGDLIKGTGGLRKIRMAVGNKGKSGGTRVIYFLATKEVIYLVMAYPKAIKISLTDSEKIELKKLTKKLKGER

Flanking regions ( +/- flanking 50bp)

AGGTGGTGTACATTGTACACTTTTAAATGATGGATTAGAAAGGGAACTTAATGAGTCATGCTATAGAATTTATTGAAACCTCAATATTTACTCAGCAAATCAAACTATTGGCTACAGATAAAGAAATAAGAATACTTCAAAATGAACTTATCAGTAAACCTGATAAAGGCGACTTAATTAAAGGAACAGGTGGATTACGCAAAATAAGAATGGCTGTAGGTAACAAAGGTAAAAGTGGGGGGACTAGAGTTATTTATTTTTTAGCGACTAAGGAAGTTATCTATTTAGTTATGGCGTATCCAAAAGCAATAAAAATTAGTTTAACTGATTCAGAAAAGATTGAGTTAAAAAAACTAACAAAAAAACTTAAAGGTGAACGGTGATATGAGTTTCTTCAATGATCTAAAAGCCTCTTTAGAAGAAGCCGTAGAAA