Homologs in group_3857

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1 homologs were identified in 1 genome with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
PMI_RS02720 PMI_RS02720 41.5 Proteus mirabilis HI4320 - type II toxin-antitoxin system RelE/ParE family toxin

Distribution of the homologs in the orthogroup group_3857

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3857

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q9KMA6 4.86e-22 85 45 0 100 1 higB-2 Toxin HigB-2 Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS15330
Feature type CDS
Gene -
Product type II toxin-antitoxin system RelE/ParE family toxin
Location 50270 - 50593 (strand: -1)
Length 324 (nucleotides) / 107 (amino acids)

Contig

Accession term accessions NZ_VXKB01000005 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 213534 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3857
Orthogroup size 2
N. genomes 2

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Genomic region

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG4737 Function unknown (S) S Uncharacterized conserved protein

Protein Sequence

MNYLVFIETTIFSSIRQELMTDDEFRELQSYLLESYKQGNTISQTGGCKKIRWYQKGTGKRGGLRIIYYPRPAYERLYLLLIYPKSIKDDLDSHEKAILRSFSQKLD

Flanking regions ( +/- flanking 50bp)

AGTTTATACTCTGTCACTACACTCCCCATACTGATATGAGGAGTGGCGCAATGAATTACCTGGTATTTATCGAAACGACAATATTCAGCAGTATTCGTCAGGAACTAATGACTGATGATGAATTCCGGGAACTGCAAAGCTATCTTTTGGAAAGCTACAAACAGGGAAATACGATTAGCCAGACCGGCGGATGTAAAAAAATTCGCTGGTATCAGAAGGGAACCGGCAAGCGGGGTGGCTTGAGGATTATTTATTATCCGCGCCCTGCATATGAAAGGCTGTATCTTCTGCTTATCTACCCTAAAAGTATAAAAGATGATTTGGATAGTCATGAAAAGGCCATACTCAGATCGTTTTCTCAAAAACTGGATTAAGTTTATATAACTAACTTCCCACACTTCCGGCAGGAGAGATTCATTATGGA