Homologs in group_126

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10 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_13065 FBDBKF_13065 33.4 Morganella morganii S1 - Phage tail length tape-measure protein 1
EHELCC_19810 EHELCC_19810 32.8 Morganella morganii S2 - hypothetical protein
EHELCC_19850 EHELCC_19850 33.0 Morganella morganii S2 - hypothetical protein
NLDBIP_19845 NLDBIP_19845 32.8 Morganella morganii S4 - hypothetical protein
NLDBIP_19875 NLDBIP_19875 33.0 Morganella morganii S4 - hypothetical protein
LHKJJB_19815 LHKJJB_19815 32.8 Morganella morganii S3 - hypothetical protein
LHKJJB_19840 LHKJJB_19840 33.0 Morganella morganii S3 - hypothetical protein
HKOGLL_06005 HKOGLL_06005 33.4 Morganella morganii S5 - Phage tail length tape-measure protein 1
F4V73_RS02200 F4V73_RS02200 35.8 Morganella psychrotolerans - phage tail tape measure protein
F4V73_RS17845 F4V73_RS17845 27.4 Morganella psychrotolerans - hypothetical protein

Distribution of the homologs in the orthogroup group_126

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_126

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q6XQC4 5.11e-141 448 34 11 860 3 38 Tape measure protein Escherichia phage T1
O64330 4.81e-122 395 34 8 744 3 gene Tape measure protein Escherichia phage N15 16
P03736 1.79e-109 362 32 15 795 1 H Tape measure protein Escherichia phage lambda
P85501 1.29e-23 111 23 12 539 1 18 Tape measure protein Pseudomonas phage PAJU2
P77658 5.78e-05 50 26 4 186 4 ynaA Protein YnaA Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS02570
Feature type CDS
Gene -
Product phage tail tape measure protein
Location 562176 - 565115 (strand: 1)
Length 2940 (nucleotides) / 979 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_126
Orthogroup size 11
N. genomes 7

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Genomic region

Domains

PF06791 Prophage tail length tape measure protein
PF09718 Lambda phage tail tape-measure protein (Tape_meas_lam_C)

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG5281 Mobilome: prophages, transposons (X) X Phage-related minor tail protein

Protein Sequence

MADIATISLKADTSDLERGTQKLKEFGDTAEKVSGSSRNLNDQFNRGVDHQKRAADAIKRQKKELDDLLNSINPTNKAFDALDKATQKLIEANKKGILPKDQFADYNAILEQTRDKLTRVNMSLTAEGRALLAQEAATNRAKQAADDFLNSLKNQTEIIGKTRTEILELKAAQLGVSQQAAPMINKLKEQEKAFMNGSITIGQYKQAMRQLPMQMSDIVTSLASGMPVWMVMIQQGGQIKDSFGGVGNSLKALASLITPARVAMFGFAGAAAAVALAAYKGSQEFGEYNKQLILTGGYAGRTAAQLDALARSLSGNGIAQYGMADTISKVVGSGSFSGRDVDMVSKTAAAMEKTVGQSVDETIKQFQRLQEDPVKAVTELDKSLHFLTATQLEQITTLQTQGKEQEAAKMAMESYANAMDERTKQIKENLGHLERAWEGVKNMASSAWDAMLDIGRENTLEQQIKEYEEALIEFQINPASKGLYYNKTGLMPDEVKSKLALLKEEKFQRDIKNAREKAARDEEERKKAQFRADQELKRQYETAEEKHQRLLKEIINNADASQAAKDEAIRREKERYEKEKAKGKGKTPTYRPDYGTRVDESANQALLSLQAQLKVLKEHKTVSDVISSERKKLWDMEAKISILEEAQKTRQLTKDEKALLAKKDYILASQEALAIAGDEVKLQELHNRELDKQLKRVEEINARSRALELGAGKSGRMYQRDIALEKAKSPDERKALEEYYAKEDSIRANWELGVKKGFAEFQDQATNVYGNVAQISQSAFQGMSNSLSDFVLTGKANFADFTRSFLEMTTKMLMQMAMLNAMKAAFGGNAVGNFFGFASGGYTGGGGKYDPAGVVHKGEFVFTKEATQRLGVDNLYRLMDAGKRGYASGGHVGGSAPMSVTQPTAFIARNPQIAGGGVNVTIDMSGVKIETEQQQSAMPNIDVRAAEQSLKNKVKSLFISEGREGGDLYKIIKAVSGNR

Flanking regions ( +/- flanking 50bp)

CTAAAATACAACCACCTTCGGGTGGTTTTTTTATATCTGGAGGAAATTAAATGGCAGATATAGCAACAATATCATTAAAGGCTGATACGTCAGATCTGGAGCGTGGCACACAAAAGTTAAAGGAGTTCGGCGATACAGCAGAGAAGGTAAGCGGTTCTTCGCGAAATTTAAATGACCAGTTTAATAGAGGGGTTGATCATCAAAAGAGAGCAGCCGACGCGATAAAGAGGCAAAAGAAAGAACTTGATGATTTATTAAATTCAATAAATCCAACCAATAAAGCATTTGATGCGCTTGATAAAGCCACTCAAAAATTAATAGAGGCAAATAAAAAAGGGATATTACCAAAGGATCAGTTTGCAGACTATAACGCCATACTTGAGCAGACTAGAGATAAATTAACACGAGTTAATATGTCTCTTACGGCTGAAGGGCGGGCGCTATTAGCTCAAGAGGCGGCAACAAATAGAGCCAAGCAAGCTGCTGATGATTTTTTAAATTCACTGAAAAATCAAACTGAAATTATAGGCAAAACGAGGACAGAGATTTTAGAGCTAAAAGCTGCTCAACTTGGTGTGTCGCAACAAGCTGCGCCGATGATCAATAAGCTAAAAGAGCAAGAAAAAGCCTTTATGAATGGCTCAATTACCATTGGTCAATATAAACAAGCAATGCGTCAACTTCCCATGCAAATGTCAGATATTGTTACGTCATTAGCATCAGGAATGCCAGTCTGGATGGTGATGATACAACAAGGGGGGCAAATAAAGGACTCATTTGGTGGTGTCGGTAACTCACTAAAAGCGTTAGCATCACTTATTACCCCTGCAAGAGTTGCTATGTTTGGTTTTGCTGGTGCTGCGGCAGCTGTGGCGTTAGCCGCGTATAAAGGGTCGCAAGAATTTGGCGAGTATAATAAGCAGCTAATTCTTACTGGTGGTTATGCGGGAAGAACAGCGGCACAGCTAGATGCTTTGGCTAGAAGCTTGTCGGGGAATGGGATCGCTCAGTATGGAATGGCTGATACTATCTCAAAAGTAGTTGGATCTGGTTCTTTCTCGGGTCGAGATGTTGATATGGTATCTAAAACTGCTGCTGCTATGGAAAAGACCGTTGGTCAATCGGTTGATGAGACAATAAAGCAATTTCAGAGATTGCAAGAAGATCCAGTTAAAGCGGTCACTGAATTAGATAAGTCATTACATTTTTTAACTGCTACCCAATTAGAACAAATAACCACACTTCAGACGCAAGGAAAAGAGCAAGAAGCGGCTAAAATGGCTATGGAATCATATGCCAATGCTATGGATGAGCGAACCAAACAGATAAAGGAAAATCTAGGCCACCTTGAGAGAGCGTGGGAAGGGGTTAAAAACATGGCTAGTAGCGCATGGGATGCAATGCTAGACATCGGCAGAGAGAATACTCTAGAGCAGCAAATCAAAGAGTATGAAGAAGCTCTGATTGAGTTTCAAATAAACCCTGCCTCCAAGGGGCTGTATTATAACAAGACTGGATTAATGCCAGATGAAGTTAAAAGTAAACTCGCTCTACTAAAAGAAGAAAAATTTCAACGTGACATTAAAAACGCAAGAGAAAAAGCCGCAAGAGATGAGGAAGAGCGTAAAAAAGCGCAGTTTAGAGCCGATCAAGAATTAAAGCGACAATACGAAACCGCAGAGGAAAAGCACCAAAGACTACTCAAGGAGATAATAAATAATGCGGATGCATCTCAAGCTGCAAAAGATGAAGCCATCCGCCGAGAGAAAGAGCGTTACGAGAAAGAAAAAGCCAAAGGTAAAGGTAAAACCCCAACCTACCGACCAGATTATGGTACTAGAGTAGATGAATCAGCAAATCAAGCCCTATTATCCCTACAAGCACAATTAAAGGTGCTAAAAGAGCATAAAACAGTCAGTGATGTGATTAGCTCTGAGCGTAAAAAACTTTGGGATATGGAAGCGAAAATATCAATCCTTGAGGAGGCTCAGAAAACAAGACAGTTAACCAAGGACGAAAAGGCGTTGCTTGCTAAAAAGGACTACATTCTTGCTTCTCAAGAAGCATTGGCCATAGCTGGTGATGAGGTTAAGCTTCAGGAGTTACATAATCGTGAGTTAGATAAGCAACTTAAACGCGTTGAAGAAATTAATGCCAGAAGTCGCGCCTTAGAGTTGGGAGCTGGTAAGTCTGGCCGCATGTATCAACGAGACATCGCACTAGAGAAAGCTAAATCACCAGACGAGAGAAAAGCCTTAGAGGAGTATTATGCTAAGGAAGACTCTATTCGTGCTAACTGGGAGTTAGGCGTCAAGAAAGGCTTTGCTGAATTCCAAGATCAGGCAACAAACGTTTACGGTAACGTAGCTCAAATTAGTCAATCAGCATTCCAAGGCATGAGTAACAGTCTCTCTGATTTTGTATTGACGGGCAAAGCTAATTTTGCTGACTTCACTCGCTCATTCTTAGAAATGACCACCAAGATGTTAATGCAGATGGCTATGCTAAATGCTATGAAAGCGGCATTTGGTGGTAATGCGGTAGGTAATTTCTTTGGGTTTGCAAGTGGTGGTTATACAGGCGGTGGTGGTAAATATGACCCCGCTGGCGTAGTGCATAAAGGCGAGTTCGTCTTTACCAAGGAAGCAACGCAACGATTAGGTGTAGATAATCTCTATCGACTAATGGATGCAGGAAAGAGAGGTTATGCTTCAGGTGGTCATGTCGGTGGTTCTGCGCCAATGTCGGTTACACAGCCAACAGCATTTATCGCTCGCAATCCTCAAATTGCTGGTGGTGGGGTGAATGTGACAATTGATATGAGCGGCGTCAAGATTGAAACCGAACAGCAACAAAGTGCAATGCCAAATATAGATGTGAGAGCTGCTGAGCAATCGTTAAAGAATAAAGTTAAAAGCCTTTTTATTAGTGAAGGGCGAGAAGGTGGTGATTTGTACAAGATCATTAAAGCAGTATCAGGAAATAGATAATCATTTAATAAGAGAGGTATTTATGAAATTAAAATTAGGAAATATTTGTA