Homologs in group_14

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19 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_12870 FBDBKF_12870 32.9 Morganella morganii S1 - DNA helicase
FBDBKF_17050 FBDBKF_17050 35.5 Morganella morganii S1 dnaB replicative DNA helicase
FBDBKF_19710 FBDBKF_19710 36.7 Morganella morganii S1 dnaB-PI SPI-7-type island replicative DNA helicase
FBDBKF_19795 FBDBKF_19795 33.3 Morganella morganii S1 dnaB-PI SPI-7-type island replicative DNA helicase
EHELCC_10520 EHELCC_10520 33.3 Morganella morganii S2 dnaB-PI SPI-7-type island replicative DNA helicase
EHELCC_10805 EHELCC_10805 36.7 Morganella morganii S2 dnaB-PI SPI-7-type island replicative DNA helicase
EHELCC_16540 EHELCC_16540 35.5 Morganella morganii S2 dnaB replicative DNA helicase
NLDBIP_10865 NLDBIP_10865 33.3 Morganella morganii S4 dnaB-PI SPI-7-type island replicative DNA helicase
NLDBIP_11150 NLDBIP_11150 36.7 Morganella morganii S4 dnaB-PI SPI-7-type island replicative DNA helicase
NLDBIP_16750 NLDBIP_16750 35.5 Morganella morganii S4 dnaB replicative DNA helicase
LHKJJB_10205 LHKJJB_10205 36.7 Morganella morganii S3 dnaB-PI SPI-7-type island replicative DNA helicase
LHKJJB_10490 LHKJJB_10490 33.3 Morganella morganii S3 dnaB-PI SPI-7-type island replicative DNA helicase
LHKJJB_16720 LHKJJB_16720 35.5 Morganella morganii S3 dnaB replicative DNA helicase
HKOGLL_16370 HKOGLL_16370 36.7 Morganella morganii S5 dnaB-PI SPI-7-type island replicative DNA helicase
HKOGLL_16655 HKOGLL_16655 33.3 Morganella morganii S5 dnaB-PI SPI-7-type island replicative DNA helicase
HKOGLL_17685 HKOGLL_17685 35.5 Morganella morganii S5 dnaB replicative DNA helicase
F4V73_RS18530 F4V73_RS18530 35.3 Morganella psychrotolerans dnaB replicative DNA helicase
PMI_RS13005 PMI_RS13005 36.7 Proteus mirabilis HI4320 dnaB-PI SPI-7-type island replicative DNA helicase
PMI_RS13510 PMI_RS13510 35.5 Proteus mirabilis HI4320 dnaB replicative DNA helicase

Distribution of the homologs in the orthogroup group_14

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_14

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0ACB1 4.65e-90 285 38 10 441 3 dnaB Replicative DNA helicase DnaB Shigella flexneri
P0ACB0 4.65e-90 285 38 10 441 1 dnaB Replicative DNA helicase DnaB Escherichia coli (strain K12)
Q8FB22 5.18e-90 285 38 10 441 3 dnaB Replicative DNA helicase DnaB Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q8X5V3 1.42e-89 283 38 10 441 3 dnaB Replicative DNA helicase DnaB Escherichia coli O157:H7
P0A1Q4 1.53e-84 270 36 10 441 3 dnaB Replicative DNA helicase DnaB Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A1Q5 1.53e-84 270 36 10 441 3 dnaB Replicative DNA helicase DnaB Salmonella typhi
Q9CNL6 1.63e-82 265 35 9 436 3 dnaB Replicative DNA helicase DnaB Pasteurella multocida (strain Pm70)
Q8K932 2.25e-82 265 35 10 439 3 dnaB Replicative DNA helicase DnaB Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
P45256 2.83e-81 262 36 10 441 3 dnaB Replicative DNA helicase DnaB Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P57611 1.32e-79 257 35 10 439 3 dnaB Replicative DNA helicase DnaB Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS)
Q89A52 1.17e-77 252 34 9 441 3 dnaB Replicative DNA helicase DnaB Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp)
Q9X4C9 1.97e-66 223 34 12 431 1 dnaB Replicative DNA helicase DnaB Geobacillus stearothermophilus
P37469 3.78e-65 219 34 12 431 1 dnaC Replicative DNA helicase DnaC Bacillus subtilis (strain 168)
Q6ABX1 1.27e-61 210 31 14 443 3 dnaB Replicative DNA helicase DnaB Leifsonia xyli subsp. xyli (strain CTCB07)
P49519 7.75e-61 208 32 11 434 3 dnaB Probable replicative DNA helicase Trieres chinensis
P03006 1.77e-56 196 32 12 431 3 12 Replicative DNA helicase Salmonella phage P22
Q8YZA1 4.54e-52 191 34 12 392 3 dnaB Replicative DNA helicase DnaB Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)
Q9ZJM5 1.56e-48 176 30 12 458 3 dnaB Replicative DNA helicase DnaB Helicobacter pylori (strain J99 / ATCC 700824)
P9WMR3 1.88e-48 181 30 9 388 1 dnaB Replicative DNA helicase DnaB Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WMR2 1.9e-48 181 30 9 388 3 dnaB Replicative DNA helicase DnaB Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
P59966 1.9e-48 181 30 9 388 3 dnaB Replicative DNA helicase DnaB Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
Q55418 3.72e-47 177 31 12 395 1 dnaB Replicative DNA helicase DnaB Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
O25916 1.48e-46 171 29 12 458 1 dnaB Replicative DNA helicase DnaB Helicobacter pylori (strain ATCC 700392 / 26695)
O83097 3.42e-46 169 30 15 439 1 dnaB Replicative DNA helicase DnaB Treponema pallidum (strain Nichols)
Q92HG8 2.49e-44 165 30 10 413 3 dnaB Replicative DNA helicase DnaB Rickettsia conorii (strain ATCC VR-613 / Malish 7)
Q1RI04 5.02e-43 161 30 9 413 3 dnaB Replicative DNA helicase DnaB Rickettsia bellii (strain RML369-C)
Q4UL62 7.13e-43 161 30 11 414 3 dnaB Replicative DNA helicase DnaB Rickettsia felis (strain ATCC VR-1525 / URRWXCal2)
Q68WJ2 2.97e-42 159 29 11 420 3 dnaB Replicative DNA helicase DnaB Rickettsia typhi (strain ATCC VR-144 / Wilmington)
Q9ZD08 5.31e-42 158 29 11 415 3 dnaB Replicative DNA helicase DnaB Rickettsia prowazekii (strain Madrid E)
O30477 1.77e-41 161 30 9 392 3 dnaB Replicative DNA helicase DnaB Rhodothermus marinus
O78411 1.76e-38 150 28 12 383 3 dnaB Probable replicative DNA helicase Guillardia theta
Q46259 4.13e-34 136 28 12 419 3 None Probable plasmid replicative DNA helicase Chlamydia psittaci
P51333 6.23e-32 131 26 9 367 3 dnaB Probable replicative DNA helicase Porphyra purpurea
P47340 1.49e-31 129 27 15 452 3 dnaB Replicative DNA helicase DnaB Mycoplasma genitalium (strain ATCC 33530 / DSM 19775 / NCTC 10195 / G37)
P75539 2.07e-30 126 35 10 278 3 dnaB Replicative DNA helicase DnaB Mycoplasma pneumoniae (strain ATCC 29342 / M129 / Subtype 1)
Q9F5P4 7.54e-30 125 35 5 198 3 dnaB Replicative DNA helicaseDnab (Fragment) Mycobacterium intracellulare
Q1XDF3 3.69e-26 114 33 5 209 3 dnaB Probable replicative DNA helicase Neopyropia yezoensis
P0CE16 6.2e-26 113 28 17 425 3 None Probable plasmid replicative DNA helicase Chlamydia trachomatis
B0BCM3 6.2e-26 113 28 17 425 3 pL2-03 Probable plasmid replicative DNA helicase Chlamydia trachomatis serovar L2 (strain ATCC VR-902B / DSM 19102 / 434/Bu)
Q46437 4.8e-23 104 33 9 253 3 TC_A03 Probable plasmid replicative DNA helicase Chlamydia muridarum (strain MoPn / Nigg)
P46394 6.38e-23 105 34 5 198 3 dnaB Replicative DNA helicase DnaB Mycobacterium leprae (strain TN)
P46394 1.11e-16 86 28 4 223 3 dnaB Replicative DNA helicase DnaB Mycobacterium leprae (strain TN)
Q9PN90 0.000328 46 30 9 185 3 radA DNA repair protein RadA Campylobacter jejuni subsp. jejuni serotype O:2 (strain ATCC 700819 / NCTC 11168)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS02400
Feature type CDS
Gene -
Product DnaB-like helicase C-terminal domain-containing protein
Location 539122 - 540507 (strand: 1)
Length 1386 (nucleotides) / 461 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_14
Orthogroup size 20
N. genomes 7

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Genomic region

Domains

PF00772 DnaB-like helicase N terminal domain
PF03796 DnaB-like helicase C terminal domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0305 Replication, recombination and repair (L) L Replicative DNA helicase

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K02314 replicative DNA helicase [EC:5.6.2.3] DNA replication
Cell cycle - Caulobacter		 -

Protein Sequence

MNQVPNNLMAEQNVIGGLLLDPQSDNAQSIFSLLKPEDFYARHHQIIYLTLREMYTQRMPIDIMTVTDCLESKGRINQSGGFAYLAEMARETPSIANIMAYAKKIRECSAQRFVIEKTVEIQKLMMAPSELGFTDKIEQAQRLLDEATSFGKMGRKTGLRRIDDVLDDVFTDICDRQDNPEKHRGLKTGFKDFDRLLSPKQIVIGSLFVIGARPKMGKTTVLTEMAKNVSQQGKPVLLFSMEMTDKQLVERTLAQQTQINSDKFYQKLEEHEWDRLCNAIGRLKDEPNIWVDDTPGMSLQHIRSESRKIKRKVGDIGFIGVDYLTLMQAGKADRNDIAYGEITKGLKILAKELNTVVVLLVQLNRGLENRADKRPVPSDSRDTGQIEQDCDYWLGIYRDAVYHDNADETLTEMILRLNRHGKTGTVYVDQQGLSITPVDQYMAAYRAQPKREPKRYCEKSF

Flanking regions ( +/- flanking 50bp)

TATTTACTCAGACCTGAAACGGTACTCAAAACAAGGGAAGGAGCACTGTGATGAACCAAGTTCCGAATAATTTAATGGCGGAACAAAATGTTATTGGAGGACTACTGCTTGACCCGCAAAGTGATAATGCGCAATCAATTTTTTCACTGCTAAAACCTGAAGATTTTTATGCCCGACACCATCAAATTATTTATCTCACCCTGCGAGAAATGTATACCCAACGTATGCCAATAGACATCATGACGGTGACGGATTGTCTGGAGTCAAAAGGCCGAATTAATCAATCAGGTGGTTTTGCCTATCTTGCTGAGATGGCAAGAGAAACACCGAGTATTGCTAACATTATGGCTTATGCGAAAAAAATCCGAGAGTGTTCCGCACAGCGTTTTGTTATCGAAAAGACGGTTGAAATTCAAAAGCTCATGATGGCGCCAAGTGAGTTAGGTTTTACAGATAAAATTGAACAAGCACAACGCTTGCTTGATGAAGCTACTTCGTTTGGAAAAATGGGGAGAAAAACAGGGTTACGCCGAATTGATGATGTGCTGGATGATGTTTTTACCGACATTTGTGATCGACAAGATAACCCAGAGAAACATCGAGGATTAAAAACGGGATTTAAAGATTTTGACCGTCTATTAAGCCCGAAACAGATTGTCATAGGCTCACTGTTCGTGATTGGTGCTCGTCCAAAGATGGGAAAAACAACCGTTCTCACTGAAATGGCAAAAAATGTCTCACAACAAGGTAAGCCTGTATTACTGTTCAGCATGGAAATGACGGATAAACAGCTTGTTGAACGGACACTAGCCCAACAAACCCAGATTAATTCAGATAAATTTTACCAAAAGTTAGAAGAGCATGAATGGGATAGGCTTTGCAATGCCATCGGTCGCCTTAAAGATGAGCCCAATATTTGGGTGGATGATACACCAGGTATGTCCTTACAGCATATTCGCTCTGAAAGTCGGAAAATTAAACGCAAAGTCGGTGATATTGGGTTCATTGGTGTCGATTACCTCACGCTGATGCAAGCGGGAAAAGCTGACCGTAATGACATTGCCTATGGTGAAATCACTAAGGGGCTAAAAATATTAGCAAAAGAGCTCAATACGGTGGTTGTGTTGCTTGTACAACTGAATCGAGGATTGGAAAACAGAGCTGATAAACGCCCCGTACCAAGTGATTCAAGAGACACAGGACAAATCGAGCAAGATTGTGATTATTGGTTAGGCATTTATCGTGATGCGGTGTACCACGATAATGCAGATGAAACGCTGACCGAGATGATTTTAAGGCTCAATCGGCACGGTAAAACAGGCACGGTGTATGTTGACCAACAAGGATTGAGTATTACACCAGTTGATCAATATATGGCTGCTTATCGCGCTCAACCGAAACGAGAGCCTAAAAGGTATTGTGAAAAATCGTTTTAACTCATGAAAGTAAAAAGGAGACCTCGTGACAGATGATATCTGTCTCCATA