Homologs in group_4329

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0 homologs were identified in 0 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product

Distribution of the homologs in the orthogroup group_4329

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_4329

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS02385
Feature type CDS
Gene -
Product Cro/CI family transcriptional regulator
Location 537436 - 537621 (strand: 1)
Length 186 (nucleotides) / 61 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_4329
Orthogroup size 1
N. genomes 1

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Genomic region

Domains

PF15943 Bacterial toxin YdaS

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG4197 Transcription (K) K DNA-binding transcriptional regulator YdaS, prophage-encoded, Cro superfamily

Protein Sequence

MNALETTIKKAGGIPALAKKLKISDQAIRQWEQKGRIPPARYAQINELFGIPFEHLVKDKN

Flanking regions ( +/- flanking 50bp)

AAGCGTTTCTTGTATTCTTCTTGTTGTTAATCAGTTAAAGGAATATCTTTATGAATGCATTGGAAACAACAATTAAAAAAGCAGGTGGAATTCCAGCTTTAGCTAAGAAGCTAAAGATTAGCGATCAGGCCATTAGACAATGGGAGCAAAAAGGTCGCATTCCTCCTGCAAGATACGCTCAAATCAACGAACTATTCGGAATACCATTTGAGCATTTAGTAAAAGATAAAAATTAGTTTCACCCGCTCTTTTCACAATTTAGGTTCCGCCATTGTGGAACATATCA