Homologs in group_2045

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_15330 FBDBKF_15330 68.9 Morganella morganii S1 tyrA bifunctional chorismate mutase/prephenate dehydrogenase
EHELCC_10915 EHELCC_10915 68.9 Morganella morganii S2 tyrA bifunctional chorismate mutase/prephenate dehydrogenase
NLDBIP_11260 NLDBIP_11260 68.9 Morganella morganii S4 tyrA bifunctional chorismate mutase/prephenate dehydrogenase
LHKJJB_11120 LHKJJB_11120 68.9 Morganella morganii S3 tyrA bifunctional chorismate mutase/prephenate dehydrogenase
HKOGLL_09730 HKOGLL_09730 68.9 Morganella morganii S5 tyrA bifunctional chorismate mutase/prephenate dehydrogenase
F4V73_RS12120 F4V73_RS12120 66.0 Morganella psychrotolerans tyrA bifunctional chorismate mutase/prephenate dehydrogenase

Distribution of the homologs in the orthogroup group_2045

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2045

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q02287 0.0 531 67 1 373 3 tyrA T-protein Enterobacter agglomerans
P07023 0.0 522 67 1 373 1 tyrA T-protein Escherichia coli (strain K12)
P43902 3.32e-155 444 57 2 370 1 tyrA T-protein Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q8EH68 1.59e-150 432 55 2 371 3 tyrA T-protein Shewanella oneidensis (strain ATCC 700550 / JCM 31522 / CIP 106686 / LMG 19005 / NCIMB 14063 / MR-1)
Q58029 1.37e-33 132 34 5 226 3 MJ0612 Probable arogenate/prephenate dehydrogenase Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
F2RB78 3.2e-09 61 31 3 141 3 cmlC 4-amino-4-deoxyprephenate dehydrogenase Streptomyces venezuelae (strain ATCC 10712 / CBS 650.69 / DSM 40230 / JCM 4526 / NBRC 13096 / PD 04745)
Q49XG5 9.38e-08 57 23 9 240 3 tyrA Prephenate dehydrogenase Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229 / NCIMB 8711 / NCTC 7292 / S-41)
Q57696 2.28e-07 52 32 1 92 1 aroQ Chorismate mutase Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
O67085 1.29e-06 53 45 0 48 3 pheA Bifunctional chorismate mutase/prephenate dehydratase Aquifex aeolicus (strain VF5)
P72540 1.84e-06 52 30 2 140 3 papC 4-amino-4-deoxyprephenate dehydrogenase Streptomyces pristinaespiralis
O60078 1.73e-05 50 20 4 244 2 tyr1 Probable prephenate dehydrogenase [NADP(+)] Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Q8K9F8 6.53e-05 48 30 0 79 3 pheA Bifunctional chorismate mutase/prephenate dehydratase Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
P0A9K0 7.74e-05 48 23 5 196 3 pheA Bifunctional chorismate mutase/prephenate dehydratase Shigella flexneri
P0A9J8 7.74e-05 48 23 5 196 1 pheA Bifunctional chorismate mutase/prephenate dehydratase Escherichia coli (strain K12)
P0A9J9 7.74e-05 48 23 5 196 3 pheA Bifunctional chorismate mutase/prephenate dehydratase Escherichia coli O157:H7
Q944B6 0.000204 47 24 9 251 1 TYRAAT1 Arogenate dehydrogenase 1, chloroplastic Arabidopsis thaliana
F2RB77 0.000215 43 41 0 46 4 cmlD 4-amino-4-deoxychorismate mutase Streptomyces venezuelae (strain ATCC 10712 / CBS 650.69 / DSM 40230 / JCM 4526 / NBRC 13096 / PD 04745)
Q51507 0.000225 43 33 1 75 1 pchB Isochorismate pyruvate lyase Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS01885
Feature type CDS
Gene tyrA
Product bifunctional chorismate mutase/prephenate dehydrogenase
Location 441609 - 442733 (strand: 1)
Length 1125 (nucleotides) / 374 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_2045
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF01817 Chorismate mutase type II
PF02153 Prephenate dehydrogenase, nucleotide-binding domain
PF20463 Prephenate dehydrogenase, dimerization domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1605 Amino acid transport and metabolism (E) E Chorismate mutase

Kegg Ortholog Annotation(s)

Protein Sequence

MAEELQNLREQIDQVDKTLLSLLAKRMQLVAEVGEVKNRHGLPIYAPDREAAMLASRRNEAEKMGISADLIEDVLRRVMRESYSKENDKGFKTLNPQLGKIVIVGGNGKMGRLFSRLFTLSGYQVESLEADEWQSKSPAIFADAGMVIISVPIHLTVDVIEQLPPLPENCLLVDLASIKQAPLEAMLKAHNGPVLGLHPMFGPDVPSLAKQVIAYCEGRDLSHFEWLLEQLMVWGARVEAITAQEHDKNMSFIQALRHFTTFAYGQHLVKENVDLASLLRLSSPIYRLELAMIGRLFAQDPQLYADIILSSQENINLIRRYHHSLGEAIALLDINTKDEFIGSFNNVSDWFGDYASQFMKESGALLQKANDSRI

Flanking regions ( +/- flanking 50bp)

AGAAAAGTTAGCTAACCCAATAACACTTTAATAAGAAGAGGCAAGCATAGATGGCTGAAGAATTACAAAATTTGCGAGAGCAAATTGATCAGGTGGATAAAACATTGCTTTCTTTACTCGCCAAAAGAATGCAATTGGTAGCAGAAGTGGGAGAAGTTAAAAATCGCCACGGGTTACCTATCTATGCACCAGATAGAGAAGCCGCAATGCTTGCTTCTCGACGTAATGAAGCAGAAAAAATGGGTATTTCTGCTGATTTAATTGAAGATGTTTTACGTCGAGTAATGAGAGAGTCATATAGCAAAGAAAATGATAAAGGCTTTAAAACACTTAATCCCCAATTAGGCAAAATTGTCATTGTGGGGGGGAACGGAAAAATGGGGAGACTTTTTTCTCGTCTCTTTACACTTTCTGGCTATCAAGTGGAAAGTCTTGAAGCGGATGAGTGGCAAAGTAAATCTCCGGCTATTTTTGCGGATGCTGGTATGGTGATAATCAGTGTCCCAATCCATTTAACGGTTGATGTTATTGAGCAATTACCGCCCTTGCCAGAAAATTGTTTATTGGTAGATTTAGCCTCAATCAAGCAAGCGCCTTTAGAGGCGATGTTAAAAGCACATAATGGCCCTGTTTTAGGACTACATCCAATGTTTGGTCCAGATGTGCCAAGTTTAGCAAAACAAGTTATCGCTTATTGTGAAGGGCGAGATTTATCACATTTTGAGTGGTTGCTTGAGCAACTTATGGTGTGGGGAGCAAGAGTAGAGGCTATTACTGCACAAGAGCACGATAAAAATATGAGTTTTATCCAAGCATTGCGACATTTTACTACTTTTGCATATGGGCAACATTTGGTGAAAGAGAATGTCGATTTAGCCAGTTTATTAAGATTATCTTCTCCCATCTATCGTTTAGAGCTAGCGATGATTGGTAGGCTCTTTGCTCAAGATCCACAATTATATGCCGATATTATTTTATCTTCACAAGAAAACATTAACTTGATCCGTAGATATCATCATTCATTAGGTGAAGCTATAGCCTTATTAGATATAAACACAAAAGATGAATTTATTGGCTCATTTAATAATGTAAGTGATTGGTTCGGTGATTATGCTTCACAATTTATGAAAGAGAGTGGTGCGTTATTACAAAAAGCCAATGATAGCCGGATTTAGTATAAATATACATAAACGCTATACCTAATACTTATAGTAAGAAAAACGAA