Homologs in group_3876

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1 homologs were identified in 1 genome with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
PMI_RS04645 PMI_RS04645 28.5 Proteus mirabilis HI4320 - hypothetical protein

Distribution of the homologs in the orthogroup group_3876

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3876

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P03753 2.37e-08 57 21 8 244 4 ea31 Protein ea31 Escherichia phage lambda

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS01500
Feature type CDS
Gene -
Product HNH endonuclease
Location 369084 - 369944 (strand: -1)
Length 861 (nucleotides) / 286 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_3876
Orthogroup size 2
N. genomes 1

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Genomic region

Domains

PF01844 HNH endonuclease

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1403 Defense mechanisms (V) V 5-methylcytosine-specific restriction endonuclease McrA

Protein Sequence

MINLTPYSDSSISFLRSIINSKNRGDYKDRISNLFNSLNTYYQNYDTSFDNNTLNLIQQSLIFSDLEKKDLLKLYNYSSKPFANFKNQLLKLPNGRDMDTCQYCTLNSVNTLDHIIPKENYPEYAVHPKNLFPACSQCNSKKSNKWLDNNNNFEFINLYSHDLPNLQYLFANINLIGNTFNVNFELRNENNINEDIFMLIERHYINLDLLNRFKSKSNEKIAQFENIIISNIESFDILLSSALNSALVAVNKSRLIFGANHWEQILYLGLINGSAFRTYCNNKGYQ

Flanking regions ( +/- flanking 50bp)

TCTTAGTTTAAATCTTTCCATTTTATTACAAAACATGGAGATCAAAAATAATGATTAACTTAACTCCATATTCTGATTCTAGTATCTCTTTTTTACGTTCAATTATTAACTCAAAAAATAGAGGAGATTATAAAGATAGAATATCTAATTTATTTAATTCATTAAATACCTATTATCAAAATTATGATACATCTTTTGATAATAATACTTTAAATCTTATTCAACAATCGCTTATTTTTTCAGATTTAGAAAAAAAAGATTTACTCAAACTATATAATTATAGTTCAAAACCATTTGCAAATTTTAAGAATCAATTATTAAAATTACCAAATGGTAGAGATATGGATACTTGTCAGTATTGCACTTTAAATAGCGTAAATACATTAGATCATATTATTCCTAAAGAAAATTATCCTGAATATGCAGTACATCCTAAAAATTTATTTCCAGCTTGTAGTCAATGCAACAGCAAAAAATCAAATAAATGGTTAGATAATAATAATAACTTTGAGTTTATAAACTTATATTCACATGACCTACCCAATTTACAATATCTTTTTGCAAACATTAATTTAATTGGTAATACTTTCAATGTTAACTTTGAATTAAGAAATGAAAATAACATTAATGAAGATATTTTCATGCTAATTGAAAGACATTATATCAATCTTGATTTGTTAAATAGATTTAAATCAAAATCAAATGAAAAAATAGCACAATTTGAAAATATCATAATTTCAAACATAGAGAGCTTTGATATACTTCTTTCTTCTGCACTAAACTCTGCTCTAGTTGCAGTTAATAAGAGTAGACTTATTTTTGGGGCAAATCATTGGGAACAAATATTATACCTTGGATTAATAAACGGCTCTGCATTTAGAACTTATTGTAACAATAAAGGCTATCAATAATATTTTGAAAAATTAGTTAGTAGAAAAATATTTTTATATATTTAAAGTAA