Homologs in group_4309

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0 homologs were identified in 0 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product

Distribution of the homologs in the orthogroup group_4309

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_4309

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS01460
Feature type CDS
Gene -
Product fimbrial protein
Location 358651 - 359166 (strand: 1)
Length 516 (nucleotides) / 171 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_4309
Orthogroup size 1
N. genomes 1

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Genomic region

Domains

PF00419 Fimbrial protein

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3539 Cell motility (N) N Pilin (type 1 fimbrial protein)

Protein Sequence

MKNLLGVALLFISLVCNADIFINISATMVEPVCNIRSENGSAPLKIGFDTLTISSLTKSPVVKDFSLYISDCNFNNTLAIVLNPKGGSTLLYKGKNILATSTDGLGIDINEVTGGTIRSLETSKKHKINPERINSTLYRVDLQAQLVNTVPINQLKLGKFNSIVTISVTYN

Flanking regions ( +/- flanking 50bp)

ATCGTAACTTTTAATGTGGAGTATGAATAGTGCTAATATGGCTAAATAAAATGAAAAATTTATTGGGTGTAGCTTTATTATTTATTTCTCTAGTATGTAATGCTGATATTTTTATTAATATATCTGCAACAATGGTTGAACCTGTTTGTAATATACGTAGTGAAAATGGTAGTGCTCCATTAAAAATTGGTTTTGATACATTGACGATATCTTCACTGACTAAATCTCCTGTGGTAAAAGATTTTTCACTTTATATATCAGACTGTAATTTTAATAATACATTAGCCATTGTTTTAAACCCAAAAGGAGGAAGTACGCTTTTATATAAAGGAAAAAATATATTAGCAACAAGTACTGATGGGTTAGGTATAGATATTAATGAAGTGACTGGTGGAACTATTCGTTCACTGGAAACAAGTAAAAAGCATAAAATCAATCCAGAACGAATTAATTCAACTCTTTATCGTGTTGACTTACAAGCTCAGTTAGTAAATACAGTGCCTATTAATCAATTAAAACTAGGGAAGTTCAATTCAATAGTTACTATTTCAGTGACTTATAACTAATGGATATTTTTTATGTTGAAACTAATACATAAATTTTCCTCGTGGAAAAA