Homologs in group_4300

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0 homologs were identified in 0 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product

Distribution of the homologs in the orthogroup group_4300

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_4300

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P55710 3.92e-25 96 40 2 140 4 NGR_a00710 Uncharacterized protein y4yB Sinorhizobium fredii (strain NBRC 101917 / NGR234)
Q5JD03 0.000221 43 24 1 105 1 serK L-serine kinase SerK Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS01160
Feature type CDS
Gene -
Product ParB N-terminal domain-containing protein
Location 285544 - 285990 (strand: 1)
Length 447 (nucleotides) / 148 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_4300
Orthogroup size 1
N. genomes 1

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Genomic region

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1475 Cell cycle control, cell division, chromosome partitioning (D) D Chromosome segregation protein Spo0J, contains ParB-like nuclease domain

Virulence factor Annotation(s)

VF gene ID Protein VF ID Category
VFG044290 ParB N-terminal domain-containing protein VF1252 Nutritional/Metabolic factor

Protein Sequence

MEYDVVLYPIALLRPSEEVNMAHVEALTKEIVRCQRWTTPIPIEKETGIIMDGNHRYQVAHHLALTYIPCVLLDYTDTRITVYDWQNGRAFSPLRIREQILKQGNIFPYKTTRHLFSPSLPAVNFPLEQLVEKIASNHLNVFKLGVGR

Flanking regions ( +/- flanking 50bp)

TCATATCAGCCGGGATATATGATTGATTTGGAAAAAGAGGGGAGGTAAATATGGAGTATGATGTCGTGTTATATCCCATTGCCTTGCTCCGTCCTTCAGAAGAAGTCAACATGGCTCATGTTGAAGCTTTAACTAAGGAAATAGTCCGTTGCCAAAGATGGACAACACCTATACCCATTGAAAAAGAGACCGGAATTATTATGGACGGTAATCATAGGTATCAAGTCGCTCATCATCTTGCTCTCACTTATATTCCTTGTGTGTTGCTTGATTACACTGATACACGCATAACTGTGTATGATTGGCAGAATGGACGAGCGTTTAGCCCATTAAGAATAAGGGAGCAGATATTAAAGCAAGGTAATATTTTCCCTTATAAAACTACTCGACATCTATTTTCTCCAAGCCTTCCGGCCGTTAATTTTCCGCTTGAACAATTAGTTGAAAAAATAGCCAGTAATCATCTGAATGTTTTCAAGTTAGGTGTTGGTAGGTGACCATTAACAGCGGGAAAATTAAATAGCTTAGTATTTATTTGATTTGATAG