COG1475
Help to interpret the results
Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG1475, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries
within the database. 21 occurences are identified.
The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction.
Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.
Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.
Description
Description | Chromosome segregation protein Spo0J, contains ParB-like nuclease domain |
---|---|
Function(s) descr. | Cell cycle control, cell division, chromosome partitioning (D) |
Occurence in the database
COG1475 is associated with 21 different proteins (see tab "Protein list" and "Profile") |
The 21 proteins are classified into 7 different orthogroup(s) |
# | Orthogroup | Locus | Start | Stop | S. | Gene | Product | Organism |
---|---|---|---|---|---|---|---|---|
0 | group_3147 | FBDBKF_00240 | 35746 | 36540 | -1 | DNA-binding protein | Morganella morganii S1 | |
1 | group_3742 | FBDBKF_12490 | 16717 | 17346 | 1 | spo0J | Chromosome segregation protein Spo0J, contains ParB-like nuclease domain | Morganella morganii S1 |
2 | group_3110 | FBDBKF_19715 | 6519 | 8168 | 1 | parB | Chromosome partitioning protein ParB | Morganella morganii S1 |
3 | group_3587 | FBDBKF_19800 | 5914 | 7320 | 1 | parB | ParB N-terminal domain-containing protein | Morganella morganii S1 |
4 | group_3147 | EHELCC_01305 | 272328 | 273122 | 1 | DNA-binding protein | Morganella morganii S2 | |
5 | group_3587 | EHELCC_10525 | 152608 | 154014 | 1 | parB | ParB N-terminal domain-containing protein | Morganella morganii S2 |
6 | group_3110 | EHELCC_10810 | 200288 | 201937 | 1 | parB | Chromosome partitioning protein ParB | Morganella morganii S2 |
7 | group_3147 | NLDBIP_02155 | 407014 | 407808 | -1 | DNA-binding protein | Morganella morganii S4 | |
8 | group_3587 | NLDBIP_10870 | 130879 | 132285 | 1 | parB | ParB N-terminal domain-containing protein | Morganella morganii S4 |
9 | group_3110 | NLDBIP_11155 | 178559 | 180208 | 1 | parB | Chromosome partitioning protein ParB | Morganella morganii S4 |
10 | group_3147 | LHKJJB_03670 | 14255 | 15049 | -1 | DNA-binding protein | Morganella morganii S3 | |
11 | group_3110 | LHKJJB_10200 | 11320 | 12969 | -1 | parB | Chromosome partitioning protein ParB | Morganella morganii S3 |
12 | group_3587 | LHKJJB_10485 | 59243 | 60649 | -1 | parB | ParB N-terminal domain-containing protein | Morganella morganii S3 |
13 | group_3147 | HKOGLL_03375 | 272533 | 273327 | 1 | DNA-binding protein | Morganella morganii S5 | |
14 | group_3110 | HKOGLL_16365 | 11329 | 12978 | -1 | parB | Chromosome partitioning protein ParB | Morganella morganii S5 |
15 | group_3587 | HKOGLL_16650 | 59252 | 60658 | -1 | parB | ParB N-terminal domain-containing protein | Morganella morganii S5 |
16 | group_4258 | F4V73_RS18280 | 95411 | 96085 | -1 | ParB/Srx family N-terminal domain-containing protein | Morganella psychrotolerans | |
17 | group_4259 | F4V73_RS18285 | 96085 | 96786 | -1 | ParB N-terminal domain-containing protein | Morganella psychrotolerans | |
18 | group_4300 | PMI_RS01160 | 285544 | 285990 | 1 | ParB N-terminal domain-containing protein | Proteus mirabilis HI4320 | |
19 | group_3742 | PMI_RS04785 | 1051792 | 1052433 | -1 | ParB/RepB/Spo0J family partition protein | Proteus mirabilis HI4320 | |
20 | group_3110 | PMI_RS13000 | 2881615 | 2883264 | -1 | hypothetical protein | Proteus mirabilis HI4320 |