Homologs in group_1678

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_11715 FBDBKF_11715 73.6 Morganella morganii S1 - EfeO-type cupredoxin-like domain-containing protein
EHELCC_17635 EHELCC_17635 73.6 Morganella morganii S2 - EfeO-type cupredoxin-like domain-containing protein
NLDBIP_19305 NLDBIP_19305 73.6 Morganella morganii S4 - EfeO-type cupredoxin-like domain-containing protein
LHKJJB_18075 LHKJJB_18075 73.6 Morganella morganii S3 - EfeO-type cupredoxin-like domain-containing protein
HKOGLL_19005 HKOGLL_19005 73.6 Morganella morganii S5 - EfeO-type cupredoxin-like domain-containing protein
F4V73_RS07980 F4V73_RS07980 73.6 Morganella psychrotolerans - cupredoxin domain-containing protein

Distribution of the homologs in the orthogroup group_1678

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1678

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q9ZDD7 1.58e-17 75 38 0 85 4 RP394 Uncharacterized protein RP394 Rickettsia prowazekii (strain Madrid E)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS00850
Feature type CDS
Gene -
Product cupredoxin domain-containing protein
Location 212542 - 212889 (strand: -1)
Length 348 (nucleotides) / 115 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_1678
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF13473 Cupredoxin-like domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG4633 General function prediction only (R) R Plastocyanin domain containing protein

Protein Sequence

MIKHLYQYTLLLLLMIASSTLAAEKYTVELEMKEGELIPRVLNVPAKTPIRIKIRNTGSSPVEFESTQLRKEKVLAPGASSVVVIAPLKPGRYTFFDDFHLSHPQGEIVATEKAE

Flanking regions ( +/- flanking 50bp)

ATAGCCCTGTGTATAGGGCTATCTCCTCTGTTTTGTTAAGTGAAATTTCAATGATTAAACATCTCTATCAATACACGCTATTACTGCTATTAATGATAGCAAGCTCTACTTTAGCCGCAGAAAAATACACCGTTGAATTAGAAATGAAAGAGGGGGAACTGATCCCTCGAGTTTTAAATGTTCCTGCTAAAACTCCTATACGGATCAAAATTCGCAATACCGGTAGTAGCCCCGTTGAATTTGAAAGCACTCAATTACGTAAAGAAAAAGTATTAGCGCCTGGGGCGAGTTCTGTCGTTGTGATTGCGCCTCTAAAACCTGGACGTTACACCTTCTTTGATGATTTTCATCTGTCTCACCCTCAAGGTGAAATCGTTGCGACTGAAAAGGCTGAATAAATATGGGACAAGTTCTATTTGTTGTTTGGCGAGAAAGTTTTGAAGCTCTG