Homologs in group_65

Help

12 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_03680 FBDBKF_03680 63.5 Morganella morganii S1 cstA pyruvate/proton symporter CstA
FBDBKF_07845 FBDBKF_07845 88.0 Morganella morganii S1 cstA Carbon starvation protein CstA (peptide/pyruvate transporter)
EHELCC_06855 EHELCC_06855 63.5 Morganella morganii S2 cstA pyruvate/proton symporter CstA
EHELCC_13675 EHELCC_13675 88.0 Morganella morganii S2 cstA Carbon starvation protein CstA (peptide/pyruvate transporter)
NLDBIP_07180 NLDBIP_07180 63.5 Morganella morganii S4 cstA pyruvate/proton symporter CstA
NLDBIP_14120 NLDBIP_14120 88.0 Morganella morganii S4 cstA Carbon starvation protein CstA (peptide/pyruvate transporter)
LHKJJB_06715 LHKJJB_06715 63.5 Morganella morganii S3 cstA pyruvate/proton symporter CstA
LHKJJB_08730 LHKJJB_08730 88.0 Morganella morganii S3 cstA Carbon starvation protein CstA (peptide/pyruvate transporter)
HKOGLL_04215 HKOGLL_04215 63.5 Morganella morganii S5 cstA pyruvate/proton symporter CstA
HKOGLL_08280 HKOGLL_08280 88.0 Morganella morganii S5 cstA Carbon starvation protein CstA (peptide/pyruvate transporter)
F4V73_RS11190 F4V73_RS11190 63.2 Morganella psychrotolerans cstA pyruvate/proton symporter CstA
F4V73_RS13195 F4V73_RS13195 87.0 Morganella psychrotolerans - carbon starvation CstA family protein

Distribution of the homologs in the orthogroup group_65

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_65

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P39396 0.0 1303 89 2 717 1 btsT Pyruvate/proton symporter BtsT Escherichia coli (strain K12)
P15078 0.0 876 61 6 712 1 cstA Peptide transporter CstA Escherichia coli (strain K12)
Q0P9Y2 0.0 692 51 9 726 3 cstA Peptide transporter CstA Campylobacter jejuni subsp. jejuni serotype O:2 (strain ATCC 700819 / NCTC 11168)
Q9ZK47 0.0 679 50 8 711 3 cstA Peptide transporter CstA Helicobacter pylori (strain J99 / ATCC 700824)
P56190 0.0 674 50 8 710 3 cstA Peptide transporter CstA Helicobacter pylori (strain ATCC 700392 / 26695)
P9WP47 0.0 555 47 10 674 3 cstA Peptide transporter CstA Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WP46 0.0 551 47 10 674 3 cstA Peptide transporter CstA Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
P94532 8.8e-145 439 41 10 604 3 cstA Peptide transporter CstA Bacillus subtilis (strain 168)
O67304 1.61e-55 202 36 4 350 3 cstA Peptide transporter CstA Aquifex aeolicus (strain VF5)
O86233 2.62e-11 69 32 2 116 3 HI_1126.1 Uncharacterized membrane protein HI_1126.1 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS00685
Feature type CDS
Gene -
Product carbon starvation CstA family protein
Location 176000 - 178150 (strand: 1)
Length 2151 (nucleotides) / 716 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_65
Orthogroup size 13
N. genomes 7

Actions

Genomic region

Domains

PF02554 Carbon starvation protein CstA

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1966 Energy production and conversion (C)
Amino acid transport and metabolism (E)		 CE Carbon starvation protein CstA (peptide/pyruvate transporter)

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K23676 pyruvate/proton symporter - -

Protein Sequence

MNKNTFLKHIPWVILGIIGAFCLSVVALRRGEHVSALWIVVASVAVYLVAYRYYSLYIAQKVMKLDPTRATPSVINNDGLNYVPTNRYVLFGHHFAAIAGAGPLVGPVLAAQMGYLPGTLWLLAGVVLAGAVQDFMVLFISTRRNGNSLGEMIKKEMGPVPGTIALFGCFLIMIIILAVLALIVVKALAESPWGVFTVCSTVPIALFMGIYMRYIRPGRVGEVSVIGIVLLIAAIWFGGVIASDPYWGPALTFKDTTITFGLIGYAFISALLPVWLILAPRDYLATFLKIGVIVGLAIGIVILNPELKMPAMTQYIDGTGPLWKGALFPFLFITIACGAVSGFHALIASGTTPKLIANEMDARFIGYGAMLMESFVAIMALVAASIIEPGLYFAMNTPPAGLGITMPNLHELGGENTAMIMDQLKDVTVHAAATVSSWGFVISPDEILQTAKDIGEPSVLNRAGGAPTLAVGIAMVFHKILPAADMGFWYHFGILFEALFILTALDAGTRSGRFMLQDLLGNFIPYLKKTDSFIAGVIGTAGCVGLWGYLLYQGVVDPLGGVKSLWPLFGISNQMLAAVALVLGTVILIKMKRTKYIWVTVIPAVWLLICTTWALGLKLLSNDPQMEGFFYLANEYKAKILAGGADLTAAEITNMNHIVINNYTNAGLSILFLVVVYSIIFYGIRTAMKARKNPKESAQETPYVPMPKDVKISSGH

Flanking regions ( +/- flanking 50bp)

TCCCGTACTACTCTTTGGCTGTTCGGTCTTGCCTGAAAAAAAGGTGTCTCATGAACAAAAATACATTTCTTAAGCACATACCTTGGGTGATCCTCGGGATTATTGGTGCTTTTTGTCTGTCAGTGGTTGCACTACGCCGTGGTGAACACGTCAGTGCATTATGGATAGTTGTTGCTTCTGTTGCGGTCTACTTAGTCGCTTATCGTTATTACAGTCTTTATATTGCTCAAAAAGTAATGAAGCTCGATCCTACTCGAGCCACTCCTTCAGTAATTAATAATGATGGTTTGAACTATGTTCCAACTAATCGTTATGTCCTCTTTGGTCACCACTTTGCCGCTATTGCGGGTGCTGGACCACTTGTCGGGCCAGTATTGGCTGCCCAAATGGGTTATTTACCCGGTACACTGTGGTTATTAGCTGGGGTGGTACTTGCTGGAGCCGTACAAGACTTTATGGTGCTGTTTATTTCGACGCGCCGTAATGGTAACTCTCTCGGTGAGATGATAAAGAAAGAGATGGGGCCTGTACCGGGAACTATCGCGCTGTTCGGCTGTTTCCTTATCATGATCATCATTCTTGCGGTGCTAGCTCTGATTGTAGTGAAAGCATTAGCAGAAAGTCCTTGGGGAGTCTTCACCGTCTGTTCAACAGTACCTATTGCCCTATTTATGGGGATCTATATGCGCTATATTCGCCCAGGTCGTGTGGGTGAAGTTTCTGTTATTGGTATTGTTTTACTGATTGCCGCTATTTGGTTTGGTGGCGTTATCGCGAGTGATCCTTACTGGGGACCTGCATTAACCTTTAAAGACACCACTATTACTTTTGGGTTGATTGGTTATGCGTTTATCTCTGCTTTACTGCCAGTATGGCTGATTTTAGCCCCTCGTGATTATTTAGCGACTTTCCTAAAAATTGGTGTAATTGTTGGTTTAGCTATCGGGATTGTTATTCTAAATCCTGAGTTAAAAATGCCAGCGATGACCCAATATATTGATGGTACAGGACCATTATGGAAAGGGGCTCTATTCCCATTCTTATTTATTACTATTGCTTGTGGTGCAGTTTCTGGTTTCCACGCACTGATTGCATCAGGTACAACGCCTAAATTGATCGCCAATGAAATGGATGCGCGTTTTATCGGTTATGGCGCAATGTTAATGGAATCATTTGTTGCGATCATGGCATTAGTGGCTGCCTCTATTATTGAACCGGGTCTCTATTTTGCGATGAATACACCGCCTGCCGGATTAGGCATTACAATGCCAAATCTGCATGAGTTAGGGGGTGAAAACACCGCAATGATTATGGATCAATTAAAAGATGTCACCGTACACGCGGCTGCGACAGTTAGCTCATGGGGCTTTGTTATCTCACCTGATGAGATTTTACAAACTGCCAAAGATATAGGTGAGCCTTCTGTACTTAATCGTGCTGGTGGTGCACCTACATTAGCGGTGGGTATTGCTATGGTGTTCCATAAAATTTTACCTGCGGCAGATATGGGCTTCTGGTATCACTTTGGGATCTTATTTGAAGCACTCTTTATTTTAACAGCATTAGATGCAGGAACTCGTTCTGGTCGTTTTATGCTGCAAGACTTGTTAGGTAATTTTATCCCATACTTGAAGAAAACAGACTCTTTTATTGCTGGTGTTATCGGTACAGCAGGTTGTGTCGGTTTATGGGGTTATCTATTGTACCAAGGTGTTGTTGACCCACTGGGTGGTGTTAAGAGCTTATGGCCACTGTTTGGGATCTCCAATCAGATGTTAGCGGCTGTTGCACTTGTTTTAGGTACGGTCATCTTAATCAAGATGAAGAGAACGAAATACATCTGGGTAACCGTTATTCCTGCAGTATGGTTATTAATTTGTACAACATGGGCGCTAGGATTAAAACTGCTCAGTAATGATCCGCAAATGGAAGGTTTCTTCTATCTTGCTAATGAGTACAAAGCGAAAATCTTAGCCGGTGGGGCAGATCTTACTGCCGCAGAAATCACCAATATGAACCACATTGTGATTAATAACTACACCAATGCAGGTTTAAGTATTCTGTTCTTAGTGGTTGTTTACAGCATTATTTTCTACGGTATCCGTACCGCAATGAAAGCACGTAAAAATCCGAAAGAGTCAGCACAAGAAACACCATATGTACCTATGCCAAAAGATGTGAAGATATCTTCAGGTCATTAATCTTAGGCGAATAGGCTAAAAACCCCCGCACTCACTTAATGAGTGCGGGG