Homologs in group_65

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12 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_03680 FBDBKF_03680 97.1 Morganella morganii S1 cstA pyruvate/proton symporter CstA
FBDBKF_07845 FBDBKF_07845 63.9 Morganella morganii S1 cstA Carbon starvation protein CstA (peptide/pyruvate transporter)
EHELCC_06855 EHELCC_06855 97.1 Morganella morganii S2 cstA pyruvate/proton symporter CstA
EHELCC_13675 EHELCC_13675 63.9 Morganella morganii S2 cstA Carbon starvation protein CstA (peptide/pyruvate transporter)
NLDBIP_07180 NLDBIP_07180 97.1 Morganella morganii S4 cstA pyruvate/proton symporter CstA
NLDBIP_14120 NLDBIP_14120 63.9 Morganella morganii S4 cstA Carbon starvation protein CstA (peptide/pyruvate transporter)
LHKJJB_06715 LHKJJB_06715 97.1 Morganella morganii S3 cstA pyruvate/proton symporter CstA
LHKJJB_08730 LHKJJB_08730 63.9 Morganella morganii S3 cstA Carbon starvation protein CstA (peptide/pyruvate transporter)
HKOGLL_04215 HKOGLL_04215 97.1 Morganella morganii S5 cstA pyruvate/proton symporter CstA
HKOGLL_08280 HKOGLL_08280 63.9 Morganella morganii S5 cstA Carbon starvation protein CstA (peptide/pyruvate transporter)
F4V73_RS13195 F4V73_RS13195 62.7 Morganella psychrotolerans - carbon starvation CstA family protein
PMI_RS00685 PMI_RS00685 63.2 Proteus mirabilis HI4320 - carbon starvation CstA family protein

Distribution of the homologs in the orthogroup group_65

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_65

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P15078 0.0 1251 87 0 699 1 cstA Peptide transporter CstA Escherichia coli (strain K12)
P39396 0.0 870 62 4 704 1 btsT Pyruvate/proton symporter BtsT Escherichia coli (strain K12)
Q0P9Y2 0.0 714 54 8 697 3 cstA Peptide transporter CstA Campylobacter jejuni subsp. jejuni serotype O:2 (strain ATCC 700819 / NCTC 11168)
P56190 0.0 712 54 3 686 3 cstA Peptide transporter CstA Helicobacter pylori (strain ATCC 700392 / 26695)
Q9ZK47 0.0 710 54 3 686 3 cstA Peptide transporter CstA Helicobacter pylori (strain J99 / ATCC 700824)
P9WP47 0.0 630 54 4 605 3 cstA Peptide transporter CstA Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WP46 0.0 627 54 4 605 3 cstA Peptide transporter CstA Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
P94532 8.1e-157 469 45 7 568 3 cstA Peptide transporter CstA Bacillus subtilis (strain 168)
O67304 8.57e-58 208 38 6 357 3 cstA Peptide transporter CstA Aquifex aeolicus (strain VF5)
O86233 1.9e-05 51 33 7 140 3 HI_1126.1 Uncharacterized membrane protein HI_1126.1 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS11190
Feature type CDS
Gene cstA
Product pyruvate/proton symporter CstA
Location 376101 - 378203 (strand: -1)
Length 2103 (nucleotides) / 700 (amino acids)

Contig

Accession term accessions NZ_VXKB01000002 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 573139 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_65
Orthogroup size 13
N. genomes 7

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Genomic region

Domains

PF02554 Carbon starvation protein CstA

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1966 Energy production and conversion (C)
Amino acid transport and metabolism (E)		 CE Carbon starvation protein CstA (peptide/pyruvate transporter)

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K06200 carbon starvation protein - -

Protein Sequence

MKAFKQLTGFLLAIVGAFALGYIALNRGEQINALWIVVAAVCIYLVAYRYYGIFIAEKVLKVDATRMTPAFKNNDGLDYVPTDKKVLFGHHFAAIAGAGPLVGPVLAAQMGYLPGMLWLLAGVVLAGAVQDFMVLFVSTRRNGRSLGELVKEEMGNVAGVIALIACFMIMVIILAVLAMIVVKALTHSPWGTYTVAFTIPLAFFMGIYTRYIRPGCVGEVSVIGLVFLIFAIISGGWVAESPTWAPYFDYDGVQLTWMLVGYGFVAAVLPVWLLLAPRDYLSTFLKIGTIIGLAIGILIMRPMLEMPALTKFIDGTGPVWAGDLFPFLFITIACGAVSGFHALIASGTTPKMLANENQACFIGYGGMLMESFVAIMALVAACVIDPGVYFAMNSPMAMLAPPGTTDVVASAASVVSSWGFQITPETLTNIANEVGEQSIISRAGGAPTLAVGMAYILHGALGGLMDVSFWYHFAILFEALFILTAVDAGTRSARFMLQDLLGVISPALKRTDSLPANLTATALCVLAWGYFLHQGVVDPLGGINTLWPLFGIANQMLAGMALMLCAVVLFKMKRQAYAWVALVPMTWLLICTMVAGWEKVFSEDARVGFLAVANKFKAMIDSGNIPVQYTESQLSQLVFNNRLDAGLTMFFMVVVVVLAIFSVKTALKALKSDKPTDNETPYEPMPENYLDLVANSKSAH

Flanking regions ( +/- flanking 50bp)

TAATAACAAACCGAAACTACTCTACTTTACTCATTCGGACAGGTGAAATTATGAAAGCGTTCAAGCAACTCACGGGCTTTCTGCTCGCGATTGTCGGTGCCTTTGCCCTCGGATATATCGCGCTGAACCGGGGTGAGCAAATCAATGCACTCTGGATTGTTGTTGCGGCTGTCTGTATCTATCTGGTGGCGTACCGGTATTACGGGATTTTTATTGCGGAGAAAGTATTAAAAGTCGATGCAACCCGGATGACACCCGCGTTTAAAAATAATGACGGGCTTGATTATGTACCGACAGATAAAAAGGTTCTGTTCGGTCACCACTTTGCCGCCATTGCCGGTGCAGGTCCGCTGGTCGGTCCGGTTCTCGCGGCACAAATGGGCTATCTTCCCGGCATGCTCTGGTTGCTGGCCGGTGTGGTATTAGCCGGTGCGGTACAGGATTTCATGGTGCTGTTTGTCTCTACCCGCCGCAACGGGCGCTCCCTCGGAGAGTTGGTTAAAGAGGAAATGGGGAATGTTGCCGGTGTTATTGCCCTGATCGCCTGCTTTATGATCATGGTGATTATCCTCGCCGTTCTGGCAATGATTGTGGTGAAAGCCCTGACACACAGCCCGTGGGGAACTTACACTGTCGCCTTTACTATCCCGCTCGCCTTTTTTATGGGAATTTACACCCGCTATATCCGGCCGGGCTGTGTCGGGGAAGTCTCTGTTATCGGGCTGGTTTTCCTGATTTTTGCGATTATTTCCGGCGGCTGGGTAGCAGAAAGCCCGACCTGGGCTCCTTATTTTGATTATGACGGCGTTCAACTGACCTGGATGCTGGTCGGTTATGGTTTTGTCGCGGCGGTTCTGCCGGTCTGGTTACTGCTGGCACCGCGTGATTACCTGTCTACCTTCCTGAAAATCGGCACCATTATCGGGCTGGCAATCGGTATTTTAATCATGCGCCCGATGCTGGAAATGCCTGCGCTGACCAAATTTATTGATGGCACAGGTCCGGTCTGGGCGGGCGATCTCTTCCCGTTCCTGTTTATCACCATCGCCTGTGGTGCGGTATCCGGCTTCCATGCACTGATTGCCTCCGGCACTACGCCGAAAATGCTCGCCAATGAAAACCAGGCCTGTTTTATCGGCTACGGCGGCATGCTGATGGAATCGTTTGTTGCCATTATGGCGCTGGTCGCCGCCTGTGTGATCGACCCGGGCGTATACTTCGCAATGAACAGCCCGATGGCAATGCTGGCACCGCCGGGAACCACTGATGTTGTCGCATCTGCTGCCAGTGTGGTGAGCAGCTGGGGCTTCCAGATAACTCCTGAAACTTTAACCAATATTGCCAATGAAGTCGGCGAACAAAGCATTATCTCCCGCGCAGGGGGCGCGCCGACACTCGCGGTCGGTATGGCGTATATTCTCCACGGTGCGCTCGGCGGGCTGATGGATGTCTCTTTCTGGTATCACTTCGCCATTCTGTTTGAGGCGCTGTTTATCCTGACCGCAGTCGATGCGGGAACACGTTCTGCCCGCTTTATGTTGCAGGATCTGCTCGGCGTGATTTCCCCGGCACTGAAACGGACAGACTCACTACCGGCAAACCTGACCGCCACCGCGCTGTGTGTGCTGGCGTGGGGTTACTTCCTGCATCAGGGCGTGGTCGATCCGCTCGGCGGTATCAATACCCTGTGGCCGCTGTTTGGTATTGCCAACCAGATGCTGGCAGGTATGGCGCTGATGCTGTGTGCTGTGGTTCTGTTTAAGATGAAACGCCAGGCTTACGCCTGGGTGGCACTGGTGCCGATGACCTGGCTGTTAATCTGTACCATGGTTGCCGGTTGGGAAAAAGTGTTCAGCGAAGATGCCCGCGTCGGCTTCCTGGCTGTCGCGAATAAATTCAAGGCAATGATTGACAGCGGGAATATCCCGGTGCAATACACTGAGTCACAACTGTCACAACTGGTGTTTAATAACCGTCTGGATGCCGGTCTGACGATGTTCTTTATGGTTGTCGTCGTGGTGCTTGCCATCTTCTCTGTGAAGACCGCGCTCAAAGCACTGAAGTCAGATAAACCAACCGATAATGAAACACCTTATGAGCCAATGCCGGAAAACTACCTCGATTTAGTGGCAAACAGCAAATCTGCGCACTAAACTCTGGTATACTTGTTGTACTGATACCGGCGGGCAACCGCCGGTTTTCC