Homologs in group_2122

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_15940 FBDBKF_15940 65.3 Morganella morganii S1 amtB ammonium transporter AmtB
EHELCC_18540 EHELCC_18540 65.3 Morganella morganii S2 amtB ammonium transporter AmtB
NLDBIP_17375 NLDBIP_17375 65.3 Morganella morganii S4 amtB ammonium transporter AmtB
LHKJJB_17285 LHKJJB_17285 65.3 Morganella morganii S3 amtB ammonium transporter AmtB
HKOGLL_17110 HKOGLL_17110 65.3 Morganella morganii S5 amtB ammonium transporter AmtB
F4V73_RS16370 F4V73_RS16370 64.3 Morganella psychrotolerans amtB ammonium transporter AmtB

Distribution of the homologs in the orthogroup group_2122

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2122

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P69681 0.0 558 65 2 415 1 amtB Ammonium transporter AmtB Escherichia coli (strain K12)
P69680 0.0 558 65 2 415 1 amtB Ammonium transporter AmtB Escherichia coli O157:H7
Q07429 4.49e-102 312 45 6 407 1 nrgA Ammonium transporter Bacillus subtilis (strain 168)
O66515 3.13e-101 311 46 8 413 1 amt Ammonium transporter Aquifex aeolicus (strain VF5)
O28525 5.63e-101 309 46 10 404 3 amt3 Ammonium transporter Amt3 Archaeoglobus fulgidus (strain ATCC 49558 / DSM 4304 / JCM 9628 / NBRC 100126 / VC-16)
O26759 8.6e-101 309 46 4 406 3 MTH_663 Putative ammonium transporter MTH_663 Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H)
O26757 6.12e-81 258 41 5 409 3 MTH_661 Putative ammonium transporter MTH_661 Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H)
O29285 2.06e-80 256 39 11 404 1 amt1 Ammonium transporter Amt1 Archaeoglobus fulgidus (strain ATCC 49558 / DSM 4304 / JCM 9628 / NBRC 100126 / VC-16)
P9WQ65 2.71e-78 253 41 9 434 3 amt Ammonium transporter Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WQ64 2.71e-78 253 41 9 434 3 amt Ammonium transporter Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
P63520 2.71e-78 253 41 9 434 3 amt Ammonium transporter Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
Q9US00 1.35e-73 242 38 8 418 3 amt2 Ammonium transporter 2 Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Q9BLG4 2.93e-72 237 38 9 417 1 amtA Ammonium transporter 1 Dictyostelium discoideum
P54146 1.77e-71 235 34 11 422 2 amt Ammonium transporter Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / JCM 1318 / BCRC 11384 / CCUG 27702 / LMG 3730 / NBRC 12168 / NCIMB 10025 / NRRL B-2784 / 534)
Q9C0V1 1.1e-69 231 35 7 418 3 amt1 Ammonium transporter 1 Schizosaccharomyces pombe (strain 972 / ATCC 24843)
P41948 2.76e-66 223 38 9 423 1 MEP2 Ammonium transporter MEP2 Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
P53390 4.33e-66 222 35 10 420 1 MEP3 Ammonium transporter MEP3 Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
P40260 1.91e-63 215 33 7 418 1 MEP1 Ammonium transporter MEP1 Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
G7L1W7 5.13e-56 195 31 9 434 2 AMT2-4 Ammonium transporter 2 member 4 Medicago truncatula
A0A072VHJ1 2.17e-55 193 32 7 424 2 AMT2-5 Ammonium transporter 2 member 5 Medicago truncatula
G7LAA8 2.76e-55 193 31 11 427 2 AMT2-3 Ammonium transporter 2 member 3 Medicago truncatula
P54147 8.14e-55 192 33 6 405 3 sll0108 Putative ammonium transporter sll0108 Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
Q84KJ6 1.01e-54 192 30 8 441 2 AMT3-1 Ammonium transporter 3 member 1 Oryza sativa subsp. japonica
Q9P7F3 4.72e-54 191 31 9 462 3 amt3 Ammonium transporter 3 Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Q851M9 7.49e-54 189 33 9 439 2 AMT3-2 Ammonium transporter 3 member 2 Oryza sativa subsp. japonica
Q9M6N7 9.92e-52 184 29 9 431 1 AMT2 Ammonium transporter 2 Arabidopsis thaliana
Q69T29 4.61e-51 182 30 10 442 2 AMT3-3 Ammonium transporter 3 member 3 Oryza sativa subsp. japonica
Q8S230 8.23e-49 176 29 9 438 2 AMT2-2 Ammonium transporter 2 member 2 Oryza sativa subsp. japonica
Q84KJ7 1.05e-46 170 30 11 437 2 AMT2-1 Ammonium transporter 2 member 1 Oryza sativa subsp. japonica
O28528 7.61e-46 167 33 9 434 3 amt2 Ammonium transporter Amt2 Archaeoglobus fulgidus (strain ATCC 49558 / DSM 4304 / JCM 9628 / NBRC 100126 / VC-16)
Q8S233 7.96e-45 166 29 13 442 2 AMT2-3 Ammonium transporter 2 member 3 Oryza sativa subsp. japonica
Q9SQH9 1.08e-43 162 29 12 436 1 AMT1-3 Ammonium transporter 1 member 3 Arabidopsis thaliana
P54144 1.34e-42 159 30 12 440 1 AMT1-1 Ammonium transporter 1 member 1 Arabidopsis thaliana
Q9LK16 1.84e-42 159 29 10 433 3 AMT1-5 Putative ammonium transporter 1 member 5 Arabidopsis thaliana
Q9ZPJ8 2.25e-42 159 29 10 433 1 AMT1-2 Ammonium transporter 1 member 2 Arabidopsis thaliana
Q7XQ12 7.15e-40 152 30 13 435 2 AMT1-1 Ammonium transporter 1 member 1 Oryza sativa subsp. japonica
P58905 5.61e-39 149 28 11 432 2 AMT1-1 Ammonium transporter 1 member 1 Solanum lycopersicum
O04161 1.16e-38 149 29 11 445 2 AMT1-2 Ammonium transporter 1 member 2 Solanum lycopersicum
Q6K9G1 3.43e-38 147 28 10 433 2 AMT1-2 Ammonium transporter 1 member 2 Oryza sativa subsp. japonica
P72935 4.15e-38 146 31 13 407 3 sll1017 Putative ammonium transporter sll1017 Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
Q58739 1.1e-37 144 32 12 414 1 amt2 Ammonium transporter Amt2 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
Q9FVN0 3.51e-36 141 28 10 439 2 AMT1-3 Ammonium transporter 1 member 3 Solanum lycopersicum
Q6K9G3 2.25e-35 140 28 12 434 2 AMT1-3 Ammonium transporter 1 member 3 Oryza sativa subsp. japonica
Q9SVT8 4.11e-35 139 27 10 436 1 AMT1-4 Ammonium transporter 1 member 4 Arabidopsis thaliana
P54145 4.78e-35 139 28 10 432 3 amt-1 Putative ammonium transporter 1 Caenorhabditis elegans
Q60366 6.56e-35 136 31 12 409 1 amt1 Ammonium transporter Amt1 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
Q9BLG3 7.88e-35 137 29 14 431 1 amtB Ammonium transporter 2 Dictyostelium discoideum
I3R0S7 4.57e-34 136 31 11 429 1 amt1 Ammonium transporter Amt1 Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4)
P54148 1.46e-32 132 30 8 409 3 sll0537 Putative ammonium transporter sll0537 Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
B8ZYW3 5.01e-32 130 29 10 417 2 amt2 Ammonium transporter Amt2 Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4)
Q8MXY0 2.44e-30 124 28 9 416 2 amtC Ammonium transporter 3 Dictyostelium discoideum
Q21565 1.61e-25 112 26 13 446 3 amt-3 Putative ammonium transporter 3 Caenorhabditis elegans
Q20605 1.58e-19 94 26 13 428 3 amt-2 Putative ammonium transporter 2 Caenorhabditis elegans
Q3BCQ5 1.85e-08 59 28 8 251 2 RHAG Ammonium transporter Rh type A Canis lupus familiaris
Q95M75 7.35e-08 58 28 10 236 2 RHBG Ammonium transporter Rh type B Sus scrofa
Q10CV4 2.64e-06 52 28 3 152 3 AMT4-1 Putative ammonium transporter 4 member 1 Oryza sativa subsp. japonica
Q02094 2.82e-06 52 24 8 253 1 RHAG Ammonium transporter Rh type A Homo sapiens
Q19KI0 4.17e-06 52 29 7 187 2 RHCG Ammonium transporter Rh type C Sus scrofa
Q4VUZ1 7.45e-06 52 26 5 188 2 rhcg Ammonium transporter Rh type C Oncorhynchus mykiss
Q3BCQ4 8.95e-06 51 30 8 187 2 RHCG Ammonium transporter Rh type C Canis lupus familiaris
Q0IIV2 1.13e-05 51 28 10 230 2 rhbg Ammonium transporter Rh type B Xenopus tropicalis
Q9NIV0 1.6e-05 50 27 9 250 1 rhgA Rhesus-like glycoprotein A Dictyostelium discoideum
Q19KH7 1.62e-05 50 26 5 186 2 rhcg Ammonium transporter Rh type C Gasterosteus aculeatus
Q4VUI0 1.74e-05 50 25 8 232 2 RHBG Ammonium transporter Rh type B Canis lupus familiaris
Q9QXP0 2.34e-05 50 26 8 242 1 Rhcg Ammonium transporter Rh type C Mus musculus
Q69D48 2.41e-05 50 30 8 187 2 rhbg-a Ammonium transporter Rh type B-A Xenopus laevis
Q18PF5 2.43e-05 50 25 8 264 2 rhcg1 Ammonium transporter Rh type C 1 Takifugu rubripes
Q9H310 2.77e-05 50 27 10 236 1 RHBG Ammonium transporter Rh type B Homo sapiens
Q6DCG4 2.85e-05 50 29 8 187 2 rhbg-b Ammonium transporter Rh type B-B Xenopus laevis
Q9GKN7 3.22e-05 49 27 10 248 2 RHAG Ammonium transporter Rh type A Bos taurus
Q7TNN9 3.59e-05 49 25 8 242 1 Rhcg Ammonium transporter Rh type C Rattus norvegicus
Q95M74 3.6e-05 49 27 10 236 2 RHBG Ammonium transporter Rh type B Pan troglodytes
Q95JD3 4.3e-05 49 27 8 190 2 RHCG Ammonium transporter Rh type C Oryctolagus cuniculus
Q8WMW2 4.72e-05 49 25 8 236 3 RHBG Ammonium transporter Rh type B Gorilla gorilla gorilla
Q6XL41 4.91e-05 49 29 8 188 2 RHCG Ammonium transporter Rh type C Gallus gallus
Q7T3R4 6.06e-05 48 24 7 262 1 rhcg2 Ammonium transporter Rh type C 2 Takifugu rubripes
Q8WNQ5 6.65e-05 48 26 10 236 3 RHBG Ammonium transporter Rh type B Papio hamadryas
Q8WNQ6 6.89e-05 48 26 10 236 3 RHBG Ammonium transporter Rh type B Macaca mulatta
Q3BBX7 7.68e-05 48 23 9 288 2 rhcg Ammonium transporter Rh type C Tetraodon nigroviridis
Q8BUX5 0.000172 47 23 8 239 1 Rhbg Ammonium transporter Rh type B Mus musculus
Q5U4V1 0.000277 47 24 11 293 2 rhcg Ammonium transporter Rh type C Xenopus laevis
Q3BBX8 0.000342 46 25 7 190 2 rhbg Ammonium transporter Rh type B Tetraodon nigroviridis
Q9QUT0 0.00037 46 29 5 155 1 Rhag Ammonium transporter Rh type A Mus musculus
Q18PF6 0.000583 45 24 6 189 1 rhbg Ammonium transporter Rh type B Takifugu rubripes

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS00615
Feature type CDS
Gene amtB
Product ammonium transporter AmtB
Location 157599 - 158897 (strand: 1)
Length 1299 (nucleotides) / 432 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_2122
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF00909 Ammonium Transporter Family

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0004 Inorganic ion transport and metabolism (P) P Ammonia channel protein AmtB

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K03320 ammonium transporter, Amt family - -

Protein Sequence

MKRFISYFFTLALTYFLLPQLAIGATTIDIDKADNSFMLICSALVFFMTIPGIALFYGGLLRSKNVLSLMTQVMLIFSVVIILWIMFGYSLAFTAGNKIWGGWSLTFLNNISVDSVAGEINQYVHVVFQGSFAVITVALIVGALGERIRFSALLIFTVIWFTFSYIPIAHMVWGEGGWLIDDGALDFAGGTVVHINAAVAALVGAYLLGKRGDYQHTAIKPHNLPMVFTGTAVLYIGWFGFNAGSAGSANGIAALAFLNTVVATAGAVLAWTFAEWLVRRKPSMLGSCSGCIAGLVAITPAAGTVGPIGALVIGIIAGIIGLWGVVVLKRWLKADDVCDVFGIHGTCGIAGCLLTGIFTASFLGGIGYSEHMTLGKQVLTQLFSVVITLIWSSVVAYIAFKIADKLVGLRVSQEEEHDGLDITTHGERAYEQ

Flanking regions ( +/- flanking 50bp)

GTATTCGTACAGGAGAGTCTGGTGAAGAAGCCTTGTAGAGGAGCTAACAAATGAAACGATTTATTAGTTATTTTTTTACGTTAGCACTTACATACTTTTTATTACCTCAGTTAGCTATTGGAGCCACCACAATAGACATAGATAAAGCGGACAACAGTTTTATGCTGATCTGTAGTGCATTGGTGTTTTTTATGACTATTCCCGGTATCGCACTCTTTTATGGCGGGTTACTACGCAGTAAGAATGTATTATCACTAATGACGCAAGTGATGTTGATTTTCAGTGTAGTGATTATCCTTTGGATTATGTTTGGCTATAGTTTGGCGTTTACTGCTGGAAATAAGATTTGGGGTGGGTGGTCACTTACTTTTCTCAATAATATTTCAGTCGATTCTGTTGCTGGTGAAATTAATCAATATGTGCATGTTGTATTTCAAGGCTCTTTTGCGGTGATCACCGTGGCCCTGATTGTTGGCGCATTAGGTGAACGTATTCGTTTTTCAGCACTGCTTATCTTTACTGTTATTTGGTTTACTTTTTCATATATTCCCATTGCCCATATGGTATGGGGAGAAGGTGGTTGGCTTATCGATGATGGAGCATTAGATTTTGCGGGAGGGACGGTTGTCCATATTAATGCCGCTGTAGCAGCGCTTGTTGGTGCTTACTTACTAGGTAAACGAGGTGATTATCAACATACTGCGATTAAACCACATAATTTACCTATGGTCTTTACTGGTACAGCGGTACTTTATATTGGTTGGTTTGGTTTTAATGCAGGCTCTGCAGGGAGCGCTAATGGTATTGCTGCATTGGCGTTTTTAAATACAGTTGTAGCTACCGCAGGTGCAGTTCTTGCGTGGACATTTGCTGAATGGCTAGTGAGAAGGAAACCTTCTATGTTAGGTAGTTGTTCAGGATGTATTGCGGGATTAGTTGCTATTACCCCAGCCGCGGGAACCGTAGGCCCTATTGGTGCTTTGGTTATTGGTATTATTGCTGGCATCATCGGGCTTTGGGGGGTTGTGGTTCTTAAACGTTGGTTAAAAGCAGATGATGTCTGTGATGTTTTTGGTATTCATGGTACTTGTGGTATTGCGGGCTGTTTATTAACGGGCATATTTACGGCTTCATTTTTAGGGGGCATTGGTTATAGCGAGCATATGACGTTAGGTAAGCAAGTGCTAACTCAATTATTTAGTGTTGTGATTACGCTTATTTGGTCAAGTGTTGTGGCTTACATTGCCTTTAAAATCGCCGATAAGCTAGTGGGATTGCGTGTCTCACAAGAAGAAGAGCATGATGGATTAGATATAACCACTCATGGAGAAAGAGCGTACGAGCAGTAATGGTCTATTCCCCCTCAACTGAGGGGGGAATATTCTCACTGCGTTATTTG