Homologs in group_399

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_15800 FBDBKF_15800 66.7 Morganella morganii S1 yajL protein deglycase YajL
EHELCC_19650 EHELCC_19650 66.7 Morganella morganii S2 yajL protein deglycase YajL
NLDBIP_19625 NLDBIP_19625 66.7 Morganella morganii S4 yajL protein deglycase YajL
LHKJJB_19595 LHKJJB_19595 66.7 Morganella morganii S3 yajL protein deglycase YajL
HKOGLL_19505 HKOGLL_19505 66.7 Morganella morganii S5 yajL protein deglycase YajL
F4V73_RS16510 F4V73_RS16510 67.2 Morganella psychrotolerans yajL protein deglycase YajL
PMI_RS10585 PMI_RS10585 27.4 Proteus mirabilis HI4320 - DJ-1/PfpI family protein

Distribution of the homologs in the orthogroup group_399

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_399

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q46948 1.04e-82 246 61 1 197 1 yajL Protein/nucleic acid deglycase 3 Escherichia coli (strain K12)
P55880 2.94e-74 225 60 1 197 3 yajL Protein/nucleic acid deglycase YajL Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q9VA37 2.35e-35 126 38 4 193 1 dj-1beta Protein dj-1beta Drosophila melanogaster
Q9MAH3 1.09e-31 122 36 2 179 1 DJ1B Protein DJ-1 homolog B Arabidopsis thaliana
Q9MAH3 8.36e-29 114 36 4 200 1 DJ1B Protein DJ-1 homolog B Arabidopsis thaliana
Q9FPF0 4.38e-31 120 38 4 202 1 DJ1A Protein DJ-1 homolog A Arabidopsis thaliana
Q9FPF0 6.11e-23 97 33 2 162 1 DJ1A Protein DJ-1 homolog A Arabidopsis thaliana
Q5XJ36 1.94e-30 113 39 6 191 2 park7 Parkinson disease protein 7 homolog Danio rerio
Q7TQ35 5.32e-30 112 39 5 188 1 PARK7 Parkinson disease protein 7 homolog Mesocricetus auratus
A1Z9J4 4.82e-28 108 37 5 190 1 DJ-1alpha Protein DJ-1alpha Drosophila melanogaster
Q99LX0 1.65e-27 105 38 5 188 1 Park7 Parkinson disease protein 7 homolog Mus musculus
Q95LI9 8.05e-27 104 38 5 188 2 PARK7 Parkinson disease protein 7 homolog Chlorocebus aethiops
O88767 8.77e-27 103 38 5 188 1 Park7 Parkinson disease protein 7 homolog Rattus norvegicus
Q99497 8.86e-27 103 38 5 188 1 PARK7 Parkinson disease protein 7 Homo sapiens
P90994 2.62e-26 102 39 8 189 1 djr-1.1 Glutathione-independent glyoxalase DJR-1.1 Caenorhabditis elegans
Q5E946 4.31e-26 102 38 5 188 2 PARK7 Parkinson disease protein 7 homolog Bos taurus
Q8VY09 9.42e-25 103 34 3 197 2 DJ1C Protein DJ-1 homolog C Arabidopsis thaliana
Q8VY09 1.77e-20 91 34 4 183 2 DJ1C Protein DJ-1 homolog C Arabidopsis thaliana
Q8UW59 2.57e-24 97 36 6 189 2 PARK7 Protein/nucleic acid deglycase DJ-1 Gallus gallus
O16228 3.08e-23 94 35 7 188 1 djr-1.2 Glutathione-independent glyoxalase DJR-1.2 Caenorhabditis elegans
Q10356 2.55e-18 82 30 7 193 1 hsp3106 Glutathione-independent glyoxalase DJ-1 Schizosaccharomyces pombe (strain 972 / ATCC 24843)
O59413 1.44e-12 66 29 5 174 1 PH1704 Deglycase PH1704 Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
Q9V1F8 3.14e-11 62 29 5 174 3 PYRAB04690 Deglycase PYRAB04690 Pyrococcus abyssi (strain GE5 / Orsay)
Q51732 4.06e-10 59 28 5 171 1 pfpI Deglycase PfpI Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)
Q49WT1 3.42e-05 46 24 5 177 3 SSP1625 Uncharacterized protein SSP1625 Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229 / NCIMB 8711 / NCTC 7292 / S-41)
Q4L7I2 6.7e-05 45 23 5 177 3 SH1084 Uncharacterized protein SH1084 Staphylococcus haemolyticus (strain JCSC1435)
P0A0K3 6.75e-05 45 24 5 177 3 SAOUHSC_02013 Uncharacterized protein SAOUHSC_02013 Staphylococcus aureus (strain NCTC 8325 / PS 47)
Q5HEP9 6.75e-05 45 24 5 177 3 SACOL1933 Uncharacterized protein SACOL1933 Staphylococcus aureus (strain COL)
P0A0K0 6.75e-05 45 24 5 177 1 SAV1875 Uncharacterized protein SAV1875 Staphylococcus aureus (strain Mu50 / ATCC 700699)
P0A0K2 6.75e-05 45 24 5 177 3 MW1815 Uncharacterized protein MW1815 Staphylococcus aureus (strain MW2)
Q6G859 6.75e-05 45 24 5 177 3 SAS1797 Uncharacterized protein SAS1797 Staphylococcus aureus (strain MSSA476)
P0A0K1 6.75e-05 45 24 5 177 3 SA1692 Uncharacterized protein SA1692 Staphylococcus aureus (strain N315)
Q6GFI2 8.37e-05 45 24 5 177 3 SAR1965 Uncharacterized protein SAR1965 Staphylococcus aureus (strain MRSA252)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS00480
Feature type CDS
Gene yajL
Product protein deglycase YajL
Location 126594 - 127211 (strand: -1)
Length 618 (nucleotides) / 205 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_399
Orthogroup size 8
N. genomes 7

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Genomic region

Domains

PF01965 DJ-1/PfpI family

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0693 Defense mechanisms (V) V Protein/nucleotide deglycase, PfpI/YajL/DJ-1 family (repair of methylglyoxal-glycated proteins and nucleic acids)

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K03152 protein deglycase [EC:3.5.1.124] - -

Protein Sequence

MTISALICLANGSEETEVVTTADLLVRAGIKVILASAEDDVDDLVITCSRGIKLIADVPLVRVVDHHYDAIILPGGLIGAETLRDSPLVVEKVRRMHSENRLVAAICAAPAIILESHNLFPIGNMTGFPGLKDKIEPKKWVDYRVYFDERVNLITSQAPATTIDFALKIIERLKGKAVAADVAKQLVLPPGIYNYQDEFTGFGDR

Flanking regions ( +/- flanking 50bp)

ACCCGAAAATAAGCGACTTTTTCAATTTATAAAACAGAAGGAAGGCAATTATGACCATATCCGCACTCATCTGTCTAGCTAATGGTAGTGAAGAAACAGAGGTTGTTACCACCGCTGATTTACTCGTTAGAGCTGGAATTAAGGTCATACTTGCTAGTGCTGAAGATGATGTTGATGACTTAGTGATCACCTGCTCACGAGGGATCAAATTAATTGCTGATGTCCCATTAGTTCGTGTTGTTGATCACCATTATGATGCCATTATTTTACCCGGAGGATTAATAGGTGCAGAAACCTTACGAGATAGTCCTCTTGTTGTTGAAAAAGTACGCCGCATGCACAGTGAAAATAGACTAGTTGCCGCTATTTGCGCAGCTCCTGCGATCATCTTAGAGTCTCATAACCTCTTTCCAATAGGCAATATGACAGGTTTCCCCGGCTTAAAAGATAAAATCGAACCTAAAAAATGGGTTGATTATCGGGTTTACTTTGACGAAAGAGTCAATCTGATTACTAGCCAAGCCCCTGCTACCACTATAGATTTCGCACTTAAAATTATTGAGCGCCTAAAAGGTAAAGCAGTTGCAGCTGATGTCGCTAAACAACTTGTATTACCACCAGGTATTTATAATTATCAAGATGAATTTACTGGGTTTGGGGATAGGTAAATACCATATATAGGATCTCTTACTTAACACCTAATCTTATTAATAAACAT