Homologs in group_399

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7 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_15800 FBDBKF_15800 100.0 Morganella morganii S1 yajL protein deglycase YajL
EHELCC_19650 EHELCC_19650 100.0 Morganella morganii S2 yajL protein deglycase YajL
NLDBIP_19625 NLDBIP_19625 100.0 Morganella morganii S4 yajL protein deglycase YajL
LHKJJB_19595 LHKJJB_19595 100.0 Morganella morganii S3 yajL protein deglycase YajL
F4V73_RS16510 F4V73_RS16510 87.4 Morganella psychrotolerans yajL protein deglycase YajL
PMI_RS00480 PMI_RS00480 66.7 Proteus mirabilis HI4320 yajL protein deglycase YajL
PMI_RS10585 PMI_RS10585 26.8 Proteus mirabilis HI4320 - DJ-1/PfpI family protein

Distribution of the homologs in the orthogroup group_399

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_399

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q46948 2.71e-81 243 57 0 196 1 yajL Protein/nucleic acid deglycase 3 Escherichia coli (strain K12)
P55880 1.06e-74 226 57 0 196 3 yajL Protein/nucleic acid deglycase YajL Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q9VA37 1.85e-38 134 40 4 192 1 dj-1beta Protein dj-1beta Drosophila melanogaster
Q9FPF0 8.25e-31 119 36 4 210 1 DJ1A Protein DJ-1 homolog A Arabidopsis thaliana
Q9FPF0 3.12e-21 93 33 2 160 1 DJ1A Protein DJ-1 homolog A Arabidopsis thaliana
Q5XJ36 2.26e-29 110 39 5 186 2 park7 Parkinson disease protein 7 homolog Danio rerio
Q7TQ35 1.05e-28 108 38 6 189 1 PARK7 Parkinson disease protein 7 homolog Mesocricetus auratus
Q8VY09 3.22e-28 113 34 2 198 2 DJ1C Protein DJ-1 homolog C Arabidopsis thaliana
Q8VY09 1.62e-21 94 34 4 185 2 DJ1C Protein DJ-1 homolog C Arabidopsis thaliana
Q9MAH3 3.77e-28 112 34 2 180 1 DJ1B Protein DJ-1 homolog B Arabidopsis thaliana
Q9MAH3 4.39e-28 112 34 4 208 1 DJ1B Protein DJ-1 homolog B Arabidopsis thaliana
Q99LX0 5.64e-27 104 37 6 189 1 Park7 Parkinson disease protein 7 homolog Mus musculus
Q95LI9 7.37e-27 104 38 6 189 2 PARK7 Parkinson disease protein 7 homolog Chlorocebus aethiops
Q99497 1.09e-26 103 38 6 189 1 PARK7 Parkinson disease protein 7 Homo sapiens
Q5E946 1.52e-26 103 37 6 189 2 PARK7 Parkinson disease protein 7 homolog Bos taurus
O88767 3.55e-26 102 37 6 189 1 Park7 Parkinson disease protein 7 homolog Rattus norvegicus
A1Z9J4 2.54e-25 100 35 7 199 1 DJ-1alpha Protein DJ-1alpha Drosophila melanogaster
Q8UW59 3.72e-25 99 35 4 184 2 PARK7 Protein/nucleic acid deglycase DJ-1 Gallus gallus
P90994 8.48e-24 96 33 5 188 1 djr-1.1 Glutathione-independent glyoxalase DJR-1.1 Caenorhabditis elegans
O16228 1.02e-20 88 33 6 176 1 djr-1.2 Glutathione-independent glyoxalase DJR-1.2 Caenorhabditis elegans
Q10356 3.29e-14 71 26 6 194 1 hsp3106 Glutathione-independent glyoxalase DJ-1 Schizosaccharomyces pombe (strain 972 / ATCC 24843)
O59413 3.51e-11 62 29 5 158 1 PH1704 Deglycase PH1704 Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
Q9V1F8 3.51e-11 62 30 5 157 3 PYRAB04690 Deglycase PYRAB04690 Pyrococcus abyssi (strain GE5 / Orsay)
Q51732 5.79e-10 59 27 5 158 1 pfpI Deglycase PfpI Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)
Q5JGM7 2.48e-08 54 28 5 158 3 TK1284 Deglycase TK1284 Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1)
Q8G9F9 6.77e-05 45 31 6 148 1 inhA Isonitrile hydratase Pseudomonas putida

  • Number of RefSeq hits:

General

Source Morganella morganii S5
Locus tag HKOGLL_19505
Feature type CDS
Gene yajL
Product protein deglycase YajL
Location 2347 - 2967 (strand: -1)
Length 621 (nucleotides) / 206 (amino acids)

Contig

Accession ZDB_717
Length 4691 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_399
Orthogroup size 8
N. genomes 7

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Genomic region

Domains

PF01965 DJ-1/PfpI family

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0693 Defense mechanisms (V) V Protein/nucleotide deglycase, PfpI/YajL/DJ-1 family (repair of methylglyoxal-glycated proteins and nucleic acids)

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K03152 protein deglycase [EC:3.5.1.124] - -

Protein Sequence

MPPSVLICLADGCEETETVTTADLLVRAGVTVTLASANDDGSCLVTGSRGIRIMADVPLVRVADTPFDAIVLPGGLKGAENLRDSPLVIEKIRRMHCDGHIVAAICAAPSVILVTHNLFPLGNMTGYPALEDKIPAKQWVNQRVYFDERVNLLTSQGPATAIDFALRLTERLCGQETAAKVAAELVLPPGIWDYQDTPYRTLADQG

Flanking regions ( +/- flanking 50bp)

GCCGGAACATATTCACGTTTACAGCCTCGTCAAACAAAAAGAGGAACAAAATGCCCCCTTCAGTTCTCATTTGTCTCGCTGACGGCTGCGAAGAAACCGAAACCGTCACCACTGCTGATCTGCTGGTCCGTGCCGGTGTGACGGTCACACTCGCCAGTGCCAATGATGACGGCAGCTGTCTGGTCACCGGTTCACGCGGGATCCGCATTATGGCTGATGTACCGCTGGTGCGGGTAGCGGACACCCCGTTTGATGCCATTGTGCTGCCGGGTGGCCTGAAAGGTGCGGAGAATCTGCGTGACAGCCCGCTGGTGATTGAAAAAATCCGCCGCATGCATTGTGACGGGCACATTGTTGCCGCTATCTGCGCGGCACCGTCTGTCATTCTGGTGACCCACAACCTGTTTCCGCTCGGCAATATGACCGGCTATCCGGCGCTGGAAGATAAAATACCGGCAAAACAGTGGGTCAATCAGCGGGTCTATTTTGATGAGCGCGTTAACCTGCTTACCAGCCAGGGCCCGGCCACCGCCATCGATTTTGCCCTGCGTCTGACAGAGCGTCTTTGCGGACAGGAAACCGCAGCAAAAGTGGCGGCAGAATTAGTACTGCCGCCGGGGATATGGGATTATCAGGATACCCCTTACCGCACGCTGGCTGATCAGGGCTGAATAACAAGCGGAGCCGGTGTTGCGGGCTCCTGTATTACCTCAGGAGCCTG