Homologs in group_3615

Help

4 homologs were identified in 3 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_20160 FBDBKF_20160 100.0 Morganella morganii S1 aph(3')-VI APH(3')-VI family aminoglycoside O-phosphotransferase
FBDBKF_20200 FBDBKF_20200 97.5 Morganella morganii S1 aph(3')-VIa aminoglycoside O-phosphotransferase APH(3')-VIa
LHKJJB_19550 LHKJJB_19550 100.0 Morganella morganii S3 aph(3')-VI APH(3')-VI family aminoglycoside O-phosphotransferase
HKOGLL_19465 HKOGLL_19465 100.0 Morganella morganii S5 aph(3')-VI APH(3')-VI family aminoglycoside O-phosphotransferase

Distribution of the homologs in the orthogroup group_3615

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_3615

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P09885 0.0 520 98 0 259 3 aphA-6 Aminoglycoside 3'-phosphotransferase Acinetobacter baumannii
P14508 2.04e-41 145 35 5 242 3 aphA-7 Aminoglycoside 3'-phosphotransferase Campylobacter jejuni
P0A3Y5 5.46e-39 139 34 4 245 1 aphA Aminoglycoside 3'-phosphotransferase Enterococcus faecalis
P0A3Y6 5.41e-37 134 34 5 245 3 aphA Aminoglycoside 3'-phosphotransferase Staphylococcus aureus
P00553 1.94e-29 114 30 7 262 1 aphA4 Aminoglycoside 3'-phosphotransferase Niallia circulans
P00551 1.98e-14 74 27 10 254 3 aphA1 Aminoglycoside 3'-phosphotransferase Escherichia coli
P14509 4.63e-13 70 24 8 249 3 aphA Aminoglycoside 3'-phosphotransferase Escherichia coli
Q03447 1.31e-12 69 26 10 255 3 None Aminoglycoside 3'-phosphotransferase Salmonella typhimurium
P00552 6.55e-12 67 24 7 245 1 neo Aminoglycoside 3'-phosphotransferase Klebsiella pneumoniae
P00555 1.09e-11 66 26 9 251 3 aph Aminoglycoside 3'-phosphotransferase Streptomyces fradiae
P18150 0.000119 46 21 9 252 3 aphE Streptomycin 3''-kinase Streptomyces griseus

  • Number of RefSeq hits:

General

Source Morganella morganii S4
Locus tag NLDBIP_19585
Feature type CDS
Gene aph(3')-VI
Product APH(3')-VI family aminoglycoside O-phosphotransferase
Location 2502 - 3281 (strand: 1)
Length 780 (nucleotides) / 259 (amino acids)

Contig

Accession ZDB_551
Length 7614 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3615
Orthogroup size 5
N. genomes 4

Actions

Genomic region

Domains

PF01636 Phosphotransferase enzyme family

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3231 Translation, ribosomal structure and biogenesis (J) J Aminoglycoside phosphotransferase

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K19274 aminoglycoside 3'-phosphotransferase VI [EC:2.7.1.95] - -

AMR gene Annotation(s)

Gene Description Scope Type Class Subclass HMM
aph(3')-VI APH(3')-VI family aminoglycoside O-phosphotransferase core AMR AMINOGLYCOSIDE AMIKACIN / KANAMYCIN NF033062 

Protein Sequence

MELPNIIQQFIGNSVLEPNKIGQSPSDVYSFNRNNETFFLKRSSTLYTETTYSVSREAKMLSWLSEKLKVPELIMTFQDEQFELMITKAINAKPISALFLTDQELLAIYKEALNLLNSVAIIDCPFISNIDHRLKESKFFIDNQLLDDIDQDDFDAELWGDHRTYLSLWNELTETRVEERLVFSHGDITDSNIFIDKFNEIYFLDLGRAGLADEFVDISFVERCLREDASEETAKIFLKHLKNDRPDKRNYFLKLDELN

Flanking regions ( +/- flanking 50bp)

ACCTCTCTCGCATTTGCGGGGTTTTTAATGCTGAATAAAAGGAAAACTTGATGGAATTGCCCAATATTATTCAACAATTTATTGGAAACAGCGTTTTAGAGCCAAATAAAATTGGTCAGTCGCCATCGGATGTTTATTCTTTTAATCGAAATAATGAAACTTTTTTTCTTAAGCGATCTAGCACTTTATATACAGAGACCACATACAGTGTCTCTCGCGAAGCGAAAATGTTGAGTTGGCTCTCTGAGAAATTAAAGGTGCCTGAACTCATCATGACTTTTCAGGATGAGCAGTTTGAATTAATGATCACTAAAGCGATCAATGCAAAACCAATTTCAGCGCTTTTTTTAACAGACCAAGAATTGCTTGCTATCTATAAGGAGGCACTCAATCTGTTAAATTCAGTTGCTATTATTGATTGTCCATTTATTTCAAACATTGATCATCGGTTAAAAGAGTCAAAATTTTTTATTGATAACCAACTCCTTGACGATATAGATCAAGATGATTTTGACGCTGAATTATGGGGAGACCATAGAACTTACCTAAGTCTATGGAATGAGTTAACTGAGACTCGTGTTGAAGAAAGATTGGTTTTTTCTCATGGCGATATCACGGATAGTAATATTTTTATAGATAAATTCAATGAAATTTACTTTTTAGATCTTGGCCGTGCTGGGTTAGCTGATGAATTTGTAGATATATCCTTTGTTGAACGTTGCCTAAGAGAGGATGCCTCGGAGGAAACTGCTAAAATATTTTTAAAGCATTTAAAAAATGATAGACCTGACAAAAGGAATTATTTTTTAAAACTTGATGAATTGAATTGATTCTAAGCATTATCTAAAAATACTTAATTGTCTTTTAACGTCGCTAAATT