Homologs in group_3100

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_19400 FBDBKF_19400 100.0 Morganella morganii S1 - phage major capsid protein
EHELCC_19260 EHELCC_19260 100.0 Morganella morganii S2 - phage major capsid protein
LHKJJB_19415 LHKJJB_19415 100.0 Morganella morganii S3 - phage major capsid protein
HKOGLL_19195 HKOGLL_19195 100.0 Morganella morganii S5 - phage major capsid protein
PMI_RS04545 PMI_RS04545 37.3 Proteus mirabilis HI4320 - phage major capsid protein

Distribution of the homologs in the orthogroup group_3100

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3100

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P49861 5.75e-67 220 41 1 272 1 5 Major capsid protein Enterobacteria phage HK97

  • Number of RefSeq hits:

General

Source Morganella morganii S4
Locus tag NLDBIP_19390
Feature type CDS
Gene -
Product phage major capsid protein
Location 1814 - 3028 (strand: 1)
Length 1215 (nucleotides) / 404 (amino acids)

Contig

Accession ZDB_548
Length 13402 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3100
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF05065 Phage capsid family

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG4653 Mobilome: prophages, transposons (X) X Predicted phage phi-C31 gp36 major capsid-like protein

Protein Sequence

MSDTNELLKSLKAQIEKANSDFNAKAESALTEAQKAGGLSAETKEAVDKMALELNALREAEKTIKSAMGELEQHIAQMPLQSALKAAQSFGQQLISAEVLKDINSSIQGNKRISVPVQAALISTGVAEGVVEPHRLPGVDVAPKQRLFIRDLIAPGKTQSPAIFWVQQTGFTNKAAVVPENTTKPYSDIEFATKITPVTTIAHMFKASKQILDDFSQLQSLVDAEMRYGLKFVEEQEILFGDGSGAHLHGIIPQASKYKPEFSVEKQNGIDDLRLAMLQSQLARFPASGHVLHFIDWAKIELTKDSLGRYILANPASLTGPTLWGLPVVATETAAFKGKFLTGAFNAGAQLFDREETNVVISTENADDFEKNMISIRCEERLALAVKRPEAFVYGDFTVAGAGE

Flanking regions ( +/- flanking 50bp)

GAAGAGGCGGTAAGAGCCTTTACTCCGGCACGTTAATTACTGGAGACATTATGTCTGATACAAACGAATTACTGAAAAGCCTGAAAGCGCAGATTGAAAAAGCAAACAGCGACTTTAATGCCAAGGCGGAGAGCGCACTGACAGAAGCACAAAAAGCGGGCGGACTCAGTGCAGAGACAAAAGAGGCTGTTGATAAAATGGCGCTGGAGCTTAACGCGCTGCGCGAAGCCGAAAAAACCATTAAATCCGCGATGGGGGAACTGGAACAGCACATTGCCCAGATGCCTCTTCAGAGTGCCCTGAAAGCCGCGCAATCTTTTGGTCAGCAACTGATTTCGGCAGAAGTGCTGAAGGATATTAACTCCAGCATCCAGGGGAATAAACGCATTTCTGTGCCGGTACAGGCGGCGCTGATTTCAACCGGCGTTGCCGAAGGTGTTGTTGAGCCTCACCGTCTGCCGGGTGTTGATGTGGCACCAAAACAACGGTTATTTATCCGTGATTTGATTGCTCCGGGAAAAACGCAGTCACCGGCAATCTTCTGGGTTCAGCAGACCGGATTTACCAATAAGGCAGCAGTGGTTCCGGAAAATACCACCAAGCCTTACAGTGATATTGAGTTTGCAACCAAAATCACCCCGGTAACCACTATTGCTCACATGTTTAAAGCATCCAAGCAGATCCTGGATGACTTTTCACAACTGCAGTCACTGGTGGATGCTGAAATGCGTTACGGCCTGAAGTTTGTTGAAGAACAGGAAATTTTGTTCGGTGACGGCTCCGGGGCGCATCTGCACGGCATTATCCCGCAGGCATCGAAATACAAACCTGAATTCAGTGTTGAAAAACAGAATGGTATTGATGATCTGCGCCTGGCAATGCTGCAGTCTCAGCTGGCGCGCTTCCCGGCATCCGGGCATGTCCTGCACTTTATTGACTGGGCGAAAATCGAACTGACCAAGGATTCGCTGGGGCGCTACATCCTTGCCAATCCGGCCTCACTTACCGGCCCTACACTGTGGGGATTGCCGGTCGTGGCAACAGAAACGGCGGCATTCAAAGGTAAGTTCCTGACAGGGGCGTTTAATGCCGGTGCTCAGTTGTTTGACCGTGAAGAAACCAACGTGGTGATCTCCACTGAAAACGCCGACGATTTTGAGAAAAACATGATCTCAATCCGTTGTGAAGAGCGCCTTGCCCTGGCAGTAAAACGCCCGGAAGCCTTTGTCTATGGTGATTTCACCGTAGCCGGTGCTGGTGAATAACTATCGGAAAACAGGCGGCCTGCGGGCCGCTTTTTCGTAAGGAAAATATG