Homologs in group_3084

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_18870 FBDBKF_18870 100.0 Morganella morganii S1 cobK cobalt-precorrin-6A reductase
EHELCC_17065 EHELCC_17065 100.0 Morganella morganii S2 cobK cobalt-precorrin-6A reductase
LHKJJB_09180 LHKJJB_09180 100.0 Morganella morganii S3 cobK cobalt-precorrin-6A reductase
HKOGLL_08730 HKOGLL_08730 100.0 Morganella morganii S5 cobK cobalt-precorrin-6A reductase
F4V73_RS13725 F4V73_RS13725 85.1 Morganella psychrotolerans - cobalt-precorrin-6A reductase

Distribution of the homologs in the orthogroup group_3084

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3084

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q05591 3.3e-81 248 50 0 241 3 cbiJ Cobalt-precorrin-6A reductase Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P72711 1.26e-32 123 30 3 250 3 cbiJ Cobalt-precorrin-6A reductase Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
O87691 4.07e-32 121 32 3 233 1 cbiJ Cobalt-precorrin-6A reductase Priestia megaterium
O27083 1.93e-27 110 32 4 242 3 cbiJ Cobalt-precorrin-6A reductase Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H)
Q57972 1.19e-23 99 29 5 237 3 cbiJ Cobalt-precorrin-6A reductase Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
Q977V1 1.84e-21 93 27 6 236 3 cbiJ Cobalt-precorrin-6A reductase Methanococcus maripaludis
P21920 2.62e-13 71 27 6 237 1 cobK Precorrin-6A reductase Sinorhizobium sp.
Q53139 6.76e-13 69 32 8 233 3 cobK Precorrin-6A reductase Rhodococcus erythropolis
O68098 8.22e-10 61 24 4 230 1 cobK Precorrin-6A reductase Rhodobacter capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003)
P9WP89 1.3e-08 57 25 7 232 1 cobK Precorrin-6A reductase Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WP88 1.3e-08 57 25 7 232 3 cobK Precorrin-6A reductase Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)

  • Number of RefSeq hits:

General

Source Morganella morganii S4
Locus tag NLDBIP_18445
Feature type CDS
Gene cobK
Product cobalt-precorrin-6A reductase
Location 18675 - 19463 (strand: -1)
Length 789 (nucleotides) / 262 (amino acids)

Contig

Accession ZDB_541
Length 32595 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3084
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF02571 Precorrin-6x reductase CbiJ/CobK

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2099 Coenzyme transport and metabolism (H) H Precorrin-6x reductase

Kegg Ortholog Annotation(s)

Protein Sequence

MNDGRLLIFGGTSDARLLCERLDAQGVRYRLSVATAAGRQQAAGLQGEIREGRMDAQAMAEYCRRHGIRLLADLSHPYAAVLSDTILQVQRELGIPLVRYNRPSDIDAVDNPLIYKTDSIDSACEIAMTLGQRILLTTGSKQLADYIARLPGKTVLARVLPTQEVLAQCESYGMTIDQIFALKGPFSAEFNEAFYRYCGTDVVITKESGTQGGFSEKIAPCLALGIPCIVVVRPQTRVSGDVTELQDLCGVEQYLTSRFSVC

Flanking regions ( +/- flanking 50bp)

TCCACCTATATCAGTGATGACCTGATGATCACACCACGGGGATACAAACTGTGAATGACGGCAGACTGCTGATTTTCGGCGGGACCAGTGATGCCCGTCTGCTCTGTGAGCGCCTGGATGCACAGGGAGTCCGCTACCGGCTCTCGGTCGCCACCGCCGCAGGCCGTCAGCAAGCAGCCGGATTACAGGGTGAGATCCGGGAAGGCCGGATGGATGCACAGGCGATGGCGGAATACTGCCGCCGTCACGGGATCCGCCTGCTGGCGGATCTCTCGCATCCTTACGCCGCCGTGCTCAGCGACACTATTTTGCAGGTGCAGCGTGAGCTGGGCATTCCGCTGGTGCGTTATAACCGCCCGAGTGATATTGACGCGGTTGATAACCCGCTGATTTACAAAACGGACTCCATCGACAGCGCCTGTGAGATTGCCATGACACTCGGTCAGCGGATTTTGCTGACCACCGGCAGCAAACAGCTGGCGGATTATATTGCCCGGCTGCCGGGCAAAACCGTGCTCGCGCGGGTACTGCCGACACAGGAAGTGCTGGCGCAGTGCGAATCTTACGGGATGACCATTGACCAGATTTTTGCCCTCAAAGGGCCGTTTTCGGCGGAATTTAATGAAGCGTTTTACCGTTACTGCGGCACGGATGTGGTGATCACCAAAGAGTCCGGCACCCAGGGCGGATTCAGTGAAAAAATCGCCCCCTGTCTGGCGCTGGGAATTCCCTGCATTGTCGTGGTACGCCCGCAGACCCGGGTGTCCGGTGATGTGACTGAATTGCAGGATCTTTGCGGGGTAGAGCAGTATCTGACATCCCGTTTTTCTGTCTGTTGATTTACTGAGGTTATGAGATGAAAAAAGCGTTATTAGTGATTAGTTTCGGC