Homologs in group_3052

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_18230 FBDBKF_18230 100.0 Morganella morganii S1 ydcZ DUF606 domain-containing protein
EHELCC_18265 EHELCC_18265 100.0 Morganella morganii S2 ydcZ DUF606 domain-containing protein
LHKJJB_18385 LHKJJB_18385 100.0 Morganella morganii S3 ydcZ DUF606 domain-containing protein
HKOGLL_18120 HKOGLL_18120 100.0 Morganella morganii S5 ydcZ DUF606 domain-containing protein
F4V73_RS01760 F4V73_RS01760 91.0 Morganella psychrotolerans - DMT family transporter

Distribution of the homologs in the orthogroup group_3052

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3052

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella morganii S4
Locus tag NLDBIP_18190
Feature type CDS
Gene ydcZ
Product DUF606 domain-containing protein
Location 12248 - 12784 (strand: -1)
Length 537 (nucleotides) / 178 (amino acids)

Contig

Accession ZDB_540
Length 35191 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3052
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF04657 Putative inner membrane exporter, YdcZ

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3238 Function unknown (S) S Uncharacterized membrane protein YdcZ, DUF606 family

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K09936 bacterial/archaeal transporter family-2 protein Quorum sensing -

Protein Sequence

MSTLSLSAIALIVCAFFAGAIVPVQAVSNAVLARHLGHPLWASLVSLLISIIVLAPLLFIFKVPKPVLSADLLHQPFWIWLGGIAGMLYLTSALILVPKIGGITFFVMVIAGQLVISALIEHFGLFGMPKQPVQIAKLAGIGLVVAGVLVMQFAGEKKPRDTDSGAGNATQVEQTIKR

Flanking regions ( +/- flanking 50bp)

GGGGATCACCTATGATTGATGTTAATAAAACGTTAACCAGGGAGACCACTATGTCAACCTTATCATTATCCGCTATTGCTTTGATTGTTTGTGCTTTTTTTGCCGGTGCCATTGTGCCGGTACAGGCGGTCAGCAATGCCGTGTTAGCACGCCATCTGGGTCATCCGTTATGGGCCAGTCTTGTATCATTATTAATCAGTATTATTGTTTTAGCACCGTTATTATTTATTTTTAAAGTTCCGAAGCCGGTACTGAGTGCAGATTTATTGCATCAGCCGTTTTGGATCTGGCTCGGCGGGATAGCCGGAATGCTGTATCTGACCTCCGCCCTGATCCTGGTGCCGAAAATCGGCGGCATTACCTTTTTCGTGATGGTGATTGCCGGTCAGCTGGTGATTTCCGCGCTGATTGAACACTTCGGTCTGTTCGGAATGCCGAAACAGCCGGTTCAGATAGCCAAACTCGCCGGTATCGGCCTGGTGGTGGCGGGTGTGCTGGTGATGCAGTTTGCGGGTGAAAAAAAGCCCCGCGATACTGACAGCGGGGCAGGAAATGCAACTCAAGTCGAACAGACAATAAAAAGATAGGTTTGGTTTCCCGGAATATTACTGCACAGCTTCAGCTTCCTTCTCCGCTT