Homologs in group_2203

Help

6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_16870 FBDBKF_16870 100.0 Morganella morganii S1 trkH Trk system potassium transporter TrkH
EHELCC_19560 EHELCC_19560 100.0 Morganella morganii S2 trkH Trk system potassium transporter TrkH
LHKJJB_16540 LHKJJB_16540 100.0 Morganella morganii S3 trkH Trk system potassium transporter TrkH
HKOGLL_17505 HKOGLL_17505 100.0 Morganella morganii S5 trkH Trk system potassium transporter TrkH
F4V73_RS18340 F4V73_RS18340 97.9 Morganella psychrotolerans trkH Trk system potassium transporter TrkH
PMI_RS17655 PMI_RS17655 86.5 Proteus mirabilis HI4320 trkH Trk system potassium transporter TrkH

Distribution of the homologs in the orthogroup group_2203

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_2203

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0AFZ9 0.0 773 81 0 483 3 trkH Trk system potassium uptake protein TrkH Shigella flexneri
P0AFZ7 0.0 773 81 0 483 1 trkH Trk system potassium uptake protein TrkH Escherichia coli (strain K12)
P0AFZ8 0.0 773 81 0 483 3 trkH Trk system potassium uptake protein TrkH Escherichia coli O157:H7
Q9L6L2 0.0 767 81 0 483 3 trkH Trk system potassium uptake protein TrkH Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q87TN7 0.0 603 68 1 485 1 trkH Trk system potassium uptake protein TrkH Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
E1V6C5 4.19e-176 506 55 1 483 1 trkH Trk system potassium uptake protein TrkH Halomonas elongata (strain ATCC 33173 / DSM 2581 / NBRC 15536 / NCIMB 2198 / 1H9)
P44843 7.51e-158 459 50 2 474 3 trkH Trk system potassium uptake protein TrkH Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P23849 2.52e-128 384 38 1 482 1 trkG Trk system potassium uptake protein TrkG Escherichia coli (strain K12)
E1V6K4 1.78e-61 211 35 7 482 1 trkI Trk system potassium uptake protein TrkI Halomonas elongata (strain ATCC 33173 / DSM 2581 / NBRC 15536 / NCIMB 2198 / 1H9)
Q58880 1.96e-36 143 30 15 475 3 MJ1485 Uncharacterized cation transporter MJ1485 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
O32081 1.13e-07 57 24 17 416 1 ktrB Ktr system potassium uptake protein B Bacillus subtilis (strain 168)
O87953 0.000139 48 24 19 448 1 ktrB Ktr system potassium uptake protein B Vibrio alginolyticus

  • Number of RefSeq hits:

General

Source Morganella morganii S4
Locus tag NLDBIP_16930
Feature type CDS
Gene trkH
Product Trk system potassium transporter TrkH
Location 66343 - 67794 (strand: 1)
Length 1452 (nucleotides) / 483 (amino acids)

Contig

Accession ZDB_534
Length 68509 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2203
Orthogroup size 7
N. genomes 7

Actions

Genomic region

Domains

PF02386 Cation transport protein

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0168 Inorganic ion transport and metabolism (P) P Trk-type K+ transport system, membrane component

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K03498 trk/ktr system potassium uptake protein - -

Protein Sequence

MHFRAITRIVGLLVIIFSVTMIIPGIVALIYKDGAGKAFSQTFLAALIIGLLLWIPNRNKKSELKPKEGFLIVVLFWTVLGSVGALPFIFSERPNLSVTDAFFESFSGLTTTGATTLVGLDTLPKAILFYRQMLQWLGGMGIIVLAVAILPLLGVGGMQLYRAEMPGPLKDNKMRPRIAETAKTLWLIYVFLTIVCAIALWFAGMDVFDAISHSFSTIAIGGFSTHDASIGYFNSPAINTIIAIFLLISGCNYGLHFAVLTGRSLGVYWRDLEFRMFISLQLVLVVICALVLWKFDVYATEGQTLNQAFFQVVSMATTAGFSTDSFYKWPLFLPMLLLCAAFVGGCAGSTGGGLKVIRIMLLFLQGARELKRLVHPNAVYTIKLGRRALPERIIEAVWGFFSAYALVFVVSMLLLIATGVDEFSAFSAISTTLNNLGPGLGTLGENFTTLNPAGKWILVVTMLFGRLEVFTLLVLLTPTFWRD

Flanking regions ( +/- flanking 50bp)

AAATGCCCTGATGACACCACCGGAAACTGATTTCTGAGGACTCTGCTGCAATGCATTTTCGCGCCATAACCCGTATTGTCGGGTTACTTGTCATTATTTTTTCTGTCACCATGATCATTCCCGGGATTGTGGCGCTTATCTATAAAGACGGTGCAGGTAAAGCATTCAGTCAGACATTCCTGGCAGCACTGATTATCGGTCTGCTGCTCTGGATCCCGAACCGCAATAAAAAAAGTGAGTTAAAACCGAAAGAAGGTTTTCTGATTGTGGTGCTGTTCTGGACGGTGCTGGGCAGTGTCGGGGCATTACCTTTTATTTTTTCTGAGCGCCCGAACCTGTCGGTGACAGATGCGTTTTTTGAATCATTCTCCGGGCTAACCACAACGGGTGCCACCACACTGGTCGGGCTGGATACGCTGCCCAAAGCGATTTTATTCTACCGGCAGATGTTGCAGTGGCTGGGCGGGATGGGGATCATTGTATTAGCCGTCGCTATCCTGCCGCTGCTGGGTGTCGGGGGAATGCAGCTGTACCGGGCGGAAATGCCGGGGCCGCTGAAAGATAATAAAATGCGCCCGAGGATTGCGGAAACAGCAAAAACGCTCTGGCTGATTTATGTGTTCCTCACCATCGTCTGTGCAATAGCCCTTTGGTTTGCGGGGATGGATGTTTTTGATGCGATATCCCACAGCTTTTCCACTATCGCTATCGGCGGGTTTTCCACTCATGATGCCAGTATCGGTTACTTTAACAGTCCGGCAATCAATACCATCATTGCCATTTTCCTGCTGATCTCTGGCTGTAACTATGGCCTGCACTTTGCGGTACTTACCGGGCGCAGCCTGGGTGTTTACTGGCGGGATCTGGAATTCCGGATGTTTATTTCCCTCCAGCTTGTGCTGGTCGTGATCTGTGCGTTGGTTTTGTGGAAGTTTGATGTCTATGCTACGGAGGGACAAACCCTCAACCAGGCATTTTTCCAGGTTGTCTCGATGGCGACAACAGCCGGCTTCTCCACTGACAGTTTCTATAAATGGCCGTTATTCCTGCCGATGCTGTTGCTGTGTGCGGCATTTGTCGGCGGATGTGCGGGGTCAACCGGCGGTGGTCTGAAGGTTATCCGTATTATGCTGCTGTTCCTTCAGGGCGCACGTGAACTGAAACGCCTTGTGCATCCGAATGCGGTTTATACTATCAAACTGGGCCGCAGGGCATTACCGGAACGCATCATCGAAGCTGTCTGGGGATTTTTCTCGGCTTATGCACTGGTCTTTGTGGTCAGTATGCTGTTACTGATAGCGACAGGCGTTGATGAGTTTTCTGCTTTCTCAGCAATATCGACCACTCTGAATAACCTGGGGCCGGGGCTGGGAACACTGGGGGAGAACTTCACAACCCTGAATCCGGCCGGAAAATGGATACTTGTCGTGACGATGTTATTTGGTCGTCTGGAAGTCTTTACTTTGCTGGTATTACTGACGCCGACTTTCTGGCGTGATTAATGGAGTGTTTCATGTCGTACTTGTTGCTTTATTCCGGCCATGACGGGCAG