COG0168


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0168, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 13 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Trk-type K+ transport system, membrane component
Function(s) descr. Inorganic ion transport and metabolism (P)

Occurence in the database

COG0168 is associated with 13 different proteins (see tab "Protein list" and "Profile")
The 13 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2506 FBDBKF_01870 61769 63235 -1 trkG Trk-type K+ transport system, membrane component Morganella morganii S1
1 group_2203 FBDBKF_16870 716 2167 -1 trkH Trk system potassium transporter TrkH Morganella morganii S1
2 group_2506 EHELCC_02340 449589 451055 -1 trkG Trk-type K+ transport system, membrane component Morganella morganii S2
3 group_2203 EHELCC_19560 9291 10742 1 trkH Trk system potassium transporter TrkH Morganella morganii S2
4 group_2506 NLDBIP_01120 229081 230547 1 trkG Trk-type K+ transport system, membrane component Morganella morganii S4
5 group_2203 NLDBIP_16930 66343 67794 1 trkH Trk system potassium transporter TrkH Morganella morganii S4
6 group_2506 LHKJJB_00915 162138 163604 -1 trkG Trk-type K+ transport system, membrane component Morganella morganii S3
7 group_2203 LHKJJB_16540 716 2167 -1 trkH Trk system potassium transporter TrkH Morganella morganii S3
8 group_2506 HKOGLL_00955 167649 169115 -1 trkG Trk-type K+ transport system, membrane component Morganella morganii S5
9 group_2203 HKOGLL_17505 716 2167 -1 trkH Trk system potassium transporter TrkH Morganella morganii S5
10 group_2506 F4V73_RS04225 893312 894778 -1 TrkH family potassium uptake protein Morganella psychrotolerans
11 group_2203 F4V73_RS18340 835 2286 -1 trkH Trk system potassium transporter TrkH Morganella psychrotolerans
12 group_2203 PMI_RS17655 3874433 3875884 1 trkH Trk system potassium transporter TrkH Proteus mirabilis HI4320