Homologs in group_1601

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_10445 FBDBKF_10445 100.0 Morganella morganii S1 iorA TPP-dependent indolepyruvate ferredoxin oxidoreductase, alpha subunit
EHELCC_14780 EHELCC_14780 100.0 Morganella morganii S2 iorA TPP-dependent indolepyruvate ferredoxin oxidoreductase, alpha subunit
LHKJJB_14735 LHKJJB_14735 100.0 Morganella morganii S3 iorA TPP-dependent indolepyruvate ferredoxin oxidoreductase, alpha subunit
HKOGLL_13355 HKOGLL_13355 100.0 Morganella morganii S5 iorA TPP-dependent indolepyruvate ferredoxin oxidoreductase, alpha subunit
F4V73_RS14145 F4V73_RS14145 81.9 Morganella psychrotolerans - 4Fe-4S binding protein
PMI_RS05825 PMI_RS05825 61.1 Proteus mirabilis HI4320 - 4Fe-4S binding protein

Distribution of the homologs in the orthogroup group_1601

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1601

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P56256 2.65e-05 47 27 1 86 4 ysaA Putative electron transport protein YsaA Escherichia coli (strain K12)
Q8K9Y0 0.000126 45 28 1 114 3 nuoI NADH-quinone oxidoreductase subunit I Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
P22846 0.000294 41 48 1 50 1 fer Ferredoxin Clostridium perfringens (strain 13 / Type A)
Q58566 0.000507 44 34 2 89 4 fwdF Polyferredoxin protein FwdF Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
Q2YA98 0.000597 43 28 1 97 3 nuoI1 NADH-quinone oxidoreductase subunit I 1 Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849 / C 71)
P82853 0.000605 40 40 1 45 3 Ta0517 Probable ferredoxin TA0517 Thermoplasma acidophilum (strain ATCC 25905 / DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165)
Q2NSK6 0.001 42 29 1 97 3 nuoI NADH-quinone oxidoreductase subunit I Sodalis glossinidius (strain morsitans)

  • Number of RefSeq hits:

General

Source Morganella morganii S4
Locus tag NLDBIP_14610
Feature type CDS
Gene iorA
Product TPP-dependent indolepyruvate ferredoxin oxidoreductase, alpha subunit
Location 44667 - 45512 (strand: -1)
Length 846 (nucleotides) / 281 (amino acids)

Contig

Accession ZDB_530
Length 141725 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1601
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF00037 4Fe-4S binding domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2221 Inorganic ion transport and metabolism (P) P Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits

Protein Sequence

MNDHCVRKKLKNSQCDNCAACCPADAVTFGYLDVKIDNDRCFQCGNCLFVCPSDAIEHIPVRERSYNNNGQLVIEKKETPASAEELLVWHRQYHIRGMQIAEPEVDNWLPVLADLNLRLKALGEPIWQLAIIPPPPVDTGKRFALFRQKTVSSGLNTGRARTGLNERKKLWPDDSWFDVRPDTENCILCTACAAVCQEGAITIADNQFTVDKTKCSGCMSCRDVCFPKAIDVTPQAEKNSRPVHYAYFDAHCSSCHLPFMSWQPGQTLCPVCRSRKEKGWL

Flanking regions ( +/- flanking 50bp)

GCAGCGCACTCAACTACCTGATAAACGGCGAGAAAACCACACCACCGTCAGTGAACGATCACTGTGTCAGGAAGAAACTCAAAAACAGTCAGTGTGATAACTGCGCCGCCTGCTGCCCGGCAGATGCGGTGACATTCGGCTATCTCGACGTCAAAATTGATAATGACCGCTGTTTTCAGTGCGGAAACTGCCTGTTTGTCTGCCCCTCTGATGCCATTGAACATATCCCTGTCCGCGAACGCAGCTACAACAATAACGGGCAACTGGTGATTGAGAAAAAAGAAACCCCGGCAAGTGCGGAAGAGCTGCTGGTCTGGCACCGGCAGTACCATATCCGCGGGATGCAGATAGCAGAGCCGGAAGTTGATAACTGGCTGCCGGTGCTGGCAGATCTCAATCTGCGCCTGAAAGCACTCGGCGAACCAATCTGGCAGTTGGCCATTATCCCGCCGCCGCCGGTGGATACCGGAAAACGTTTTGCGCTGTTCCGGCAGAAAACCGTCAGTAGCGGGCTGAATACCGGCCGTGCCAGAACCGGTCTGAATGAGCGCAAAAAACTCTGGCCGGATGACAGCTGGTTCGATGTGCGTCCGGATACAGAAAACTGTATTTTGTGTACCGCCTGCGCGGCAGTGTGTCAGGAAGGGGCAATCACTATTGCGGATAATCAGTTTACCGTGGATAAGACAAAATGCAGCGGCTGCATGAGCTGCCGCGATGTCTGTTTCCCGAAAGCAATTGATGTCACACCGCAGGCAGAGAAAAACAGCCGGCCGGTTCACTATGCTTATTTTGATGCTCATTGCAGCAGCTGCCATCTGCCTTTTATGAGCTGGCAGCCGGGACAGACATTATGTCCGGTGTGCCGTTCACGAAAAGAGAAAGGCTGGCTGTAACGACAGAGATAAAAAAAGCGCCGAAAGGCGCTATTTTTATTTGTATATCA