Homologs in group_3280

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4 homologs were identified in 4 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_08860 FBDBKF_08860 100.0 Morganella morganii S1 rtcR RNA repair transcriptional activator RtcR
EHELCC_12665 EHELCC_12665 100.0 Morganella morganii S2 rtcR RNA repair transcriptional activator RtcR
LHKJJB_13550 LHKJJB_13550 100.0 Morganella morganii S3 rtcR RNA repair transcriptional activator RtcR
HKOGLL_11480 HKOGLL_11480 100.0 Morganella morganii S5 rtcR RNA repair transcriptional activator RtcR

Distribution of the homologs in the orthogroup group_3280

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3280

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P38035 0.0 663 62 2 525 4 rtcR Transcriptional regulatory protein RtcR Escherichia coli (strain K12)
Q06065 5.31e-39 151 40 6 247 1 atoC Regulatory protein AtoC Escherichia coli (strain K12)
P0AFU5 9.66e-39 150 34 5 262 1 qseF Transcriptional regulatory protein QseF Escherichia coli O157:H7
P0AFU4 9.66e-39 150 34 5 262 1 glrR Transcriptional regulatory protein GlrR Escherichia coli (strain K12)
Q9APD9 1.6e-38 149 39 4 242 3 zraR Transcriptional regulatory protein ZraR Klebsiella oxytoca
P12627 3.52e-38 150 38 3 232 1 vnfA Nitrogen fixation protein VnfA Azotobacter vinelandii
Q01265 5.99e-38 144 32 7 303 4 None Uncharacterized protein in HyuA 5'region (Fragment) Pseudomonas sp. (strain NS671)
P30667 4.11e-37 148 36 5 266 1 nifA Nif-specific regulatory protein Azospirillum brasilense
P54929 6.4e-37 147 36 5 266 4 nifA Nif-specific regulatory protein Azospirillum lipoferum
P05407 1.3e-36 146 38 4 248 1 nifA Nif-specific regulatory protein Bradyrhizobium diazoefficiens (strain JCM 10833 / BCRC 13528 / IAM 13628 / NBRC 14792 / USDA 110)
Q00934 2.02e-36 144 32 6 309 1 pilR Response regulator protein PilR Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P09133 3.06e-36 145 36 7 295 2 nifA Nif-specific regulatory protein Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 / LMG 6465 / NBRC 14845 / NCIMB 13405 / ORS 571)
G3XCV0 3.38e-36 144 31 7 322 1 fleQ Transcriptional regulator FleQ Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P25852 9.39e-36 142 37 5 246 1 zraR Transcriptional regulatory protein ZraR Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q43965 1.27e-35 143 33 8 337 1 mopR Phenol regulator MopR Acinetobacter guillouiae
Q8Z333 1.6e-35 141 37 5 246 3 zraR Transcriptional regulatory protein ZraR Salmonella typhi
P27713 1.96e-35 142 39 3 226 4 nifA Nif-specific regulatory protein Herbaspirillum seropedicae
D5ARW9 2.02e-35 143 36 4 245 4 nifA1 Nif-specific regulatory protein Rhodobacter capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003)
P09570 2.03e-35 142 38 4 241 4 nifA Nif-specific regulatory protein Azotobacter vinelandii
P0CY94 2.06e-35 143 36 4 245 4 nifA1 Nif-specific regulatory protein Rhodobacter capsulatus
P14375 2.22e-35 140 37 4 242 1 zraR Transcriptional regulatory protein ZraR Escherichia coli (strain K12)
P56266 2.41e-35 142 34 3 267 3 nifA Nif-specific regulatory protein Klebsiella oxytoca
P03027 6.01e-35 140 34 3 267 1 nifA Nif-specific regulatory protein Klebsiella pneumoniae
Q46802 9.68e-35 141 36 5 240 4 uacR Putative uric acid sigma-54-dependent transcriptional regulator UacR Escherichia coli (strain K12)
Q8X613 1.14e-34 139 37 4 242 3 zraR Transcriptional regulatory protein ZraR Escherichia coli O157:H7
Q53206 1.67e-34 140 38 5 249 4 nifA Nif-specific regulatory protein Sinorhizobium fredii (strain NBRC 101917 / NGR234)
P10577 1.69e-34 139 32 5 287 1 ntrC DNA-binding transcriptional regulator NtrC Rhizobium meliloti (strain 1021)
P54930 7.23e-34 137 35 3 252 4 nifA Nif-specific regulatory protein Enterobacter agglomerans
P28787 1.14e-33 136 38 2 210 3 ntrC DNA-binding transcriptional regulator NtrC Proteus hauseri
Q9KN48 1.15e-33 137 38 2 212 4 vasH Transcriptional regulator VasH Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
P54931 1.62e-33 137 35 4 250 4 nifA Nif-specific regulatory protein Rhizobium etli (strain ATCC 51251 / DSM 11541 / JCM 21823 / NBRC 15573 / CFN 42)
P03029 2.08e-33 135 32 6 305 1 ntrC DNA-binding transcriptional regulator NtrC Klebsiella pneumoniae
P17899 2.57e-33 135 31 6 311 4 flbD Transcriptional regulatory protein FlbD Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15)
P24426 2.73e-33 133 38 5 230 4 nifA Nif-specific regulatory protein Rhizobium leguminosarum bv. trifolii
P0AFB8 2.75e-33 135 37 3 224 1 glnG DNA-binding transcriptional regulator NtrC Escherichia coli (strain K12)
P0AFB9 2.75e-33 135 37 3 224 3 glnG DNA-binding transcriptional regulator NtrC Escherichia coli O157:H7
Q88AQ2 3.14e-33 134 31 8 327 3 algB Alginate biosynthesis transcriptional regulatory protein AlgB Pseudomonas syringae pv. tomato (strain ATCC BAA-871 / DC3000)
P12626 4.51e-33 135 32 4 252 4 anfA Nitrogen fixation protein AnfA Azotobacter vinelandii
Q88RJ6 7.07e-33 134 31 9 328 3 algB Alginate biosynthesis transcriptional regulatory protein AlgB Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440)
Q9ZIB7 1.09e-32 134 33 5 230 1 tyrR HTH-type transcriptional regulatory protein TyrR Enterobacter agglomerans
P41789 3.19e-32 132 37 3 224 1 glnG DNA-binding transcriptional regulator NtrC Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P29267 3.41e-32 132 31 8 328 3 hoxA Hydrogenase transcriptional regulatory protein HoxA Cupriavidus necator (strain ATCC 17699 / DSM 428 / KCTC 22496 / NCIMB 10442 / H16 / Stanier 337)
Q3K999 3.48e-32 130 36 3 226 3 sfnR Sigma54-dependent transcriptional regulator SfnR Pseudomonas fluorescens (strain Pf0-1)
A4WDR5 4.1e-32 132 32 7 333 3 norR Anaerobic nitric oxide reductase transcription regulator NorR Enterobacter sp. (strain 638)
O87455 1.78e-31 131 36 3 237 1 luxO Regulatory protein LuxO Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395)
Q845S7 1.79e-31 128 33 4 263 2 sfnR Sigma54-dependent transcriptional activator SfnR Pseudomonas putida
A8ANR6 2.83e-31 130 36 5 246 3 norR Anaerobic nitric oxide reductase transcription regulator NorR Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696)
O85057 3.14e-31 130 31 11 319 1 None Limonene hydroxylase Geobacillus stearothermophilus
O31551 4.15e-31 130 33 4 262 2 acoR Acetoin dehydrogenase operon transcriptional activator AcoR Bacillus subtilis (strain 168)
P06519 4.22e-31 130 35 7 269 4 xylR Transcriptional regulatory protein XylR Pseudomonas putida
Q04848 6.07e-31 129 29 5 293 3 ntrC DNA-binding transcriptional regulator NtrC Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 / LMG 6465 / NBRC 14845 / NCIMB 13405 / ORS 571)
C0PWN2 7.95e-31 129 34 5 274 3 norR Anaerobic nitric oxide reductase transcription regulator NorR Salmonella paratyphi C (strain RKS4594)
Q8D4F9 8.44e-31 129 35 7 262 3 norR Anaerobic nitric oxide reductase transcription regulator NorR Vibrio vulnificus (strain CMCP6)
P13632 8.46e-31 128 36 2 218 1 dctD C4-dicarboxylate transport transcriptional regulatory protein DctD Rhizobium meliloti (strain 1021)
P09828 2.02e-30 127 36 4 235 4 nifA Nif-specific regulatory protein Rhizobium leguminosarum
Q9I4N3 2.08e-30 127 35 4 240 1 fleR Response regulator protein FleR Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Q5PF20 2.31e-30 127 34 5 274 3 norR Anaerobic nitric oxide reductase transcription regulator NorR Salmonella paratyphi A (strain ATCC 9150 / SARB42)
B5RDG4 2.43e-30 127 35 6 270 3 norR Anaerobic nitric oxide reductase transcription regulator NorR Salmonella gallinarum (strain 287/91 / NCTC 13346)
P0C5S5 2.44e-30 126 35 5 232 3 luxO Luminescence regulatory protein LuxO Vibrio harveyi
A7MVC2 2.44e-30 126 35 5 232 1 luxO Luminescence regulatory protein LuxO Vibrio campbellii (strain ATCC BAA-1116)
Q8Z4C6 2.75e-30 127 35 6 270 3 norR Anaerobic nitric oxide reductase transcription regulator NorR Salmonella typhi
A9N0D7 2.75e-30 127 35 6 270 3 norR Anaerobic nitric oxide reductase transcription regulator NorR Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7)
B4TF23 2.75e-30 127 35 6 270 3 norR Anaerobic nitric oxide reductase transcription regulator NorR Salmonella heidelberg (strain SL476)
B5QV88 2.75e-30 127 35 6 270 3 norR Anaerobic nitric oxide reductase transcription regulator NorR Salmonella enteritidis PT4 (strain P125109)
Q57KT4 2.75e-30 127 35 6 270 3 norR Anaerobic nitric oxide reductase transcription regulator NorR Salmonella choleraesuis (strain SC-B67)
Q7MFY9 3.77e-30 127 34 7 262 3 norR Anaerobic nitric oxide reductase transcription regulator NorR Vibrio vulnificus (strain YJ016)
Q87MX7 3.79e-30 126 35 5 232 3 luxO Regulatory protein LuxO Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
B5F363 3.91e-30 127 35 6 270 3 norR Anaerobic nitric oxide reductase transcription regulator NorR Salmonella agona (strain SL483)
B5FSZ0 5.1e-30 126 36 5 246 3 norR Anaerobic nitric oxide reductase transcription regulator NorR Salmonella dublin (strain CT_02021853)
P07604 5.11e-30 126 31 5 263 1 tyrR HTH-type transcriptional regulatory protein TyrR Escherichia coli (strain K12)
Q7MM78 6.57e-30 125 35 5 232 3 luxO Regulatory protein LuxO Vibrio vulnificus (strain YJ016)
Q8CWJ5 6.57e-30 125 35 5 232 3 luxO Regulatory protein LuxO Vibrio vulnificus (strain CMCP6)
B4T3B0 8.36e-30 125 35 6 270 3 norR Anaerobic nitric oxide reductase transcription regulator NorR Salmonella newport (strain SL254)
A8GG93 9.56e-30 125 39 4 219 3 norR Anaerobic nitric oxide reductase transcription regulator NorR Serratia proteamaculans (strain 568)
P10046 1.19e-29 124 35 3 220 3 dctD C4-dicarboxylate transport transcriptional regulatory protein DctD Rhizobium leguminosarum
P54529 1.2e-29 127 34 4 226 4 yqiR Putative sigma L-dependent transcriptional regulator YqiR Bacillus subtilis (strain 168)
Q5E3W8 1.44e-29 125 35 5 246 3 norR Anaerobic nitric oxide reductase transcription regulator NorR Aliivibrio fischeri (strain ATCC 700601 / ES114)
P0A2D7 1.49e-29 125 32 5 242 3 tyrR HTH-type transcriptional regulatory protein TyrR Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A2D8 1.49e-29 125 32 5 242 3 tyrR HTH-type transcriptional regulatory protein TyrR Salmonella typhi
P03028 1.59e-29 125 34 8 300 4 nifA Nif-specific regulatory protein Rhizobium meliloti (strain 1021)
P10576 2.16e-29 124 28 5 297 3 ntrC DNA-binding transcriptional regulator NtrC Bradyrhizobium sp. (strain RP501 Parasponia)
A0KEJ0 2.59e-29 124 38 7 246 3 norR Anaerobic nitric oxide reductase transcription regulator NorR Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / DSM 30187 / BCRC 13018 / CCUG 14551 / JCM 1027 / KCTC 2358 / NCIMB 9240 / NCTC 8049)
B5Z370 2.84e-29 124 33 7 292 3 norR Anaerobic nitric oxide reductase transcription regulator NorR Escherichia coli O157:H7 (strain EC4115 / EHEC)
Q8X854 2.84e-29 124 33 7 292 3 norR Anaerobic nitric oxide reductase transcription regulator NorR Escherichia coli O157:H7
B7NSI9 3.37e-29 124 34 7 277 3 norR Anaerobic nitric oxide reductase transcription regulator NorR Escherichia coli O7:K1 (strain IAI39 / ExPEC)
P59402 3.64e-29 124 33 7 292 3 norR Anaerobic nitric oxide reductase transcription regulator NorR Shigella flexneri
Q0T1D4 3.64e-29 124 33 7 292 3 norR Anaerobic nitric oxide reductase transcription regulator NorR Shigella flexneri serotype 5b (strain 8401)
Q32CL9 3.71e-29 124 33 7 292 3 norR Anaerobic nitric oxide reductase transcription regulator NorR Shigella dysenteriae serotype 1 (strain Sd197)
Q3YYF5 3.93e-29 124 33 7 296 3 norR Anaerobic nitric oxide reductase transcription regulator NorR Shigella sonnei (strain Ss046)
B7UHC1 4.16e-29 124 33 7 296 3 norR Anaerobic nitric oxide reductase transcription regulator NorR Escherichia coli O127:H6 (strain E2348/69 / EPEC)
A9MFX7 4.36e-29 124 33 5 274 3 norR Anaerobic nitric oxide reductase transcription regulator NorR Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
B7M9E6 4.44e-29 124 33 7 296 3 norR Anaerobic nitric oxide reductase transcription regulator NorR Escherichia coli O8 (strain IAI1)
Q8ZMJ8 4.53e-29 124 34 6 270 3 norR Anaerobic nitric oxide reductase transcription regulator NorR Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
B4TT16 4.53e-29 124 34 6 270 3 norR Anaerobic nitric oxide reductase transcription regulator NorR Salmonella schwarzengrund (strain CVM19633)
P45671 4.55e-29 123 33 3 251 3 ntrC DNA-binding transcriptional regulator NtrC Azospirillum brasilense
Q9K4U8 4.55e-29 124 34 4 254 2 norR2 Nitric oxide reductase transcription regulator NorR2 Cupriavidus necator (strain ATCC 17699 / DSM 428 / KCTC 22496 / NCIMB 10442 / H16 / Stanier 337)
Q8FEN6 4.57e-29 123 33 7 296 3 norR Anaerobic nitric oxide reductase transcription regulator NorR Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
A4STH5 4.61e-29 124 35 6 251 3 norR Anaerobic nitric oxide reductase transcription regulator NorR Aeromonas salmonicida (strain A449)
B7MZ04 5.07e-29 123 33 7 296 3 norR Anaerobic nitric oxide reductase transcription regulator NorR Escherichia coli O81 (strain ED1a)
Q0TEH1 5.17e-29 123 33 7 296 3 norR Anaerobic nitric oxide reductase transcription regulator NorR Escherichia coli O6:K15:H31 (strain 536 / UPEC)
A8A3I6 5.22e-29 123 33 7 296 3 norR Anaerobic nitric oxide reductase transcription regulator NorR Escherichia coli O9:H4 (strain HS)
B1IUX0 5.84e-29 123 33 7 296 3 norR Anaerobic nitric oxide reductase transcription regulator NorR Escherichia coli (strain ATCC 8739 / DSM 1576 / NBRC 3972 / NCIMB 8545 / WDCM 00012 / Crooks)
Q31X73 6.25e-29 123 33 7 296 3 norR Anaerobic nitric oxide reductase transcription regulator NorR Shigella boydii serotype 4 (strain Sb227)
B7N6T9 6.25e-29 123 33 7 296 3 norR Anaerobic nitric oxide reductase transcription regulator NorR Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC)
P37013 6.3e-29 123 33 7 292 1 norR Anaerobic nitric oxide reductase transcription regulator NorR Escherichia coli (strain K12)
B1XCN6 6.3e-29 123 33 7 292 2 norR Anaerobic nitric oxide reductase transcription regulator NorR Escherichia coli (strain K12 / DH10B)
C4ZYV4 6.3e-29 123 33 7 292 3 norR Anaerobic nitric oxide reductase transcription regulator NorR Escherichia coli (strain K12 / MC4100 / BW2952)
B1LQ27 6.61e-29 123 33 7 296 3 norR Anaerobic nitric oxide reductase transcription regulator NorR Escherichia coli (strain SMS-3-5 / SECEC)
P71229 6.89e-29 124 32 4 251 1 hyfR DNA-binding transcriptional activator HyfR Escherichia coli (strain K12)
P23747 8.34e-29 122 32 5 261 1 algB Alginate biosynthesis transcriptional regulatory protein AlgB Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
A7ZQD8 9.47e-29 122 32 7 296 3 norR Anaerobic nitric oxide reductase transcription regulator NorR Escherichia coli O139:H28 (strain E24377A / ETEC)
Q9KT84 1.09e-28 122 30 7 286 1 luxO Regulatory protein LuxO Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
Q1R7Z1 1.15e-28 122 32 7 296 3 norR Anaerobic nitric oxide reductase transcription regulator NorR Escherichia coli (strain UTI89 / UPEC)
A1AEP9 1.15e-28 122 32 7 296 3 norR Anaerobic nitric oxide reductase transcription regulator NorR Escherichia coli O1:K1 / APEC
B7MKH8 1.15e-28 122 32 7 296 3 norR Anaerobic nitric oxide reductase transcription regulator NorR Escherichia coli O45:K1 (strain S88 / ExPEC)
B5XVA2 1.34e-28 122 36 4 222 3 norR Anaerobic nitric oxide reductase transcription regulator NorR Klebsiella pneumoniae (strain 342)
B6I695 1.4e-28 122 32 7 296 3 norR Anaerobic nitric oxide reductase transcription regulator NorR Escherichia coli (strain SE11)
B7LEC0 1.52e-28 122 32 7 296 3 norR Anaerobic nitric oxide reductase transcription regulator NorR Escherichia coli (strain 55989 / EAEC)
P36219 1.7e-28 119 35 3 212 4 wtsA Pathogenicity locus probable regulatory protein WtsA Pantoea stewartii subsp. stewartii
P37930 1.78e-28 118 38 5 213 4 hrpR Pathogenicity locus probable regulatory protein HrpR Pseudomonas syringae pv. syringae
P37931 1.88e-28 118 37 2 211 4 hrpS Pathogenicity locus probable regulatory protein HrpS Pseudomonas syringae pv. syringae
B7LW25 1.94e-28 122 34 7 277 3 norR Anaerobic nitric oxide reductase transcription regulator NorR Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CCUG 18766 / IAM 14443 / JCM 21226 / LMG 7866 / NBRC 102419 / NCTC 12128 / CDC 0568-73)
Q6D8R9 3.22e-28 121 37 4 221 3 norR Anaerobic nitric oxide reductase transcription regulator NorR Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672)
A6TCX4 4.02e-28 121 36 4 222 3 norR Anaerobic nitric oxide reductase transcription regulator NorR Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578)
E1WAA4 5.55e-28 122 36 5 238 3 fhlA Formate hydrogenlyase transcriptional activator Salmonella typhimurium (strain SL1344)
P19323 5.6e-28 122 38 3 185 1 fhlA Formate hydrogenlyase transcriptional activator FhlA Escherichia coli (strain K12)
P0CL46 5.76e-28 121 36 5 238 1 fhlA Formate hydrogenlyase transcriptional activator Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q9HU19 6.79e-28 119 32 6 297 3 dctD C4-dicarboxylate transport transcriptional regulatory protein DctD Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P38022 8.2e-28 119 34 4 232 1 rocR Transcriptional activator RocR Bacillus subtilis (strain 168)
P28614 8.98e-28 121 28 12 416 1 acoR Acetoin catabolism regulatory protein Cupriavidus necator (strain ATCC 17699 / DSM 428 / KCTC 22496 / NCIMB 10442 / H16 / Stanier 337)
O54426 5.02e-27 117 31 5 245 3 tyrR HTH-type transcriptional regulatory protein TyrR Citrobacter braakii
P77743 1.26e-26 116 36 5 230 1 prpR Propionate catabolism operon regulatory protein Escherichia coli (strain K12)
P31908 1.37e-26 116 34 5 263 3 hoxA Hydrogenase transcriptional regulatory protein HoxA Bradyrhizobium diazoefficiens (strain JCM 10833 / BCRC 13528 / IAM 13628 / NBRC 14792 / USDA 110)
P74839 1.8e-26 116 36 7 229 4 prpR Propionate catabolism operon regulatory protein Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P26316 2.94e-26 112 32 5 274 4 hrpS Pathogenicity locus probable regulatory protein HrpS Pseudomonas savastanoi pv. phaseolicola
O25408 1.14e-25 112 31 4 227 1 flgR Transcriptional regulatory protein FlgR Helicobacter pylori (strain ATCC 700392 / 26695)
P37344 2.25e-25 110 34 5 232 1 pspF Psp operon transcriptional activator Escherichia coli (strain K12)
Q9K4V0 1.19e-24 110 34 4 229 2 norR1 Nitric oxide reductase transcription regulator NorR1 Cupriavidus necator (strain ATCC 17699 / DSM 428 / KCTC 22496 / NCIMB 10442 / H16 / Stanier 337)
Q04849 1.55e-24 109 34 5 223 3 ntrX Nitrogen assimilation regulatory protein NtrX Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 / LMG 6465 / NBRC 14845 / NCIMB 13405 / ORS 571)
P26047 2.59e-24 110 28 10 298 4 stc Signal-transduction and transcriptional-control protein Clostridium beijerinckii
P44694 3.99e-21 97 29 6 248 1 tyrR HTH-type transcriptional regulatory protein TyrR Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P26408 4.33e-20 96 32 5 230 1 hupR1 Hydrogenase transcriptional regulatory protein HupR1 Rhodobacter capsulatus
P76016 1.38e-19 95 31 4 230 1 dhaR PTS-dependent dihydroxyacetone kinase operon regulatory protein Escherichia coli (strain K12)
P23914 4.27e-19 94 29 9 262 3 levR Transcriptional regulatory protein LevR Bacillus subtilis (strain 168)
Q9ZCY9 4.75e-17 87 28 6 218 3 RP562 Putative response regulator NtrX-like Rickettsia prowazekii (strain Madrid E)
Q68WH4 1.67e-16 85 27 6 218 3 RT0550 Putative response regulator NtrX-like Rickettsia typhi (strain ATCC VR-144 / Wilmington)
P54156 4.02e-16 83 30 7 229 2 yplP Putative sigma L-dependent transcriptional regulator YplP Bacillus subtilis (strain 168)
Q1RJS1 4.28e-16 84 29 8 235 3 RBE_0312 Putative response regulator NtrX-like Rickettsia bellii (strain RML369-C)
Q4UL27 9.04e-16 83 28 8 222 3 RF_0895 Putative response regulator NtrX-like Rickettsia felis (strain ATCC VR-1525 / URRWXCal2)
P45512 1.32e-15 83 27 11 320 4 dhaR Glycerol metabolism operon regulatory protein Citrobacter freundii
P09432 6.86e-15 80 25 6 279 3 ntrC DNA-binding transcriptional regulator NtrC Rhodobacter capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003)
D0ZLR9 4.14e-14 79 34 8 188 2 dgaR Transcriptional regulatory protein DagR Salmonella typhimurium (strain 14028s / SGSC 2262)
Q92HC2 2.13e-13 75 27 6 217 3 RC0849 Putative response regulator NtrX-like Rickettsia conorii (strain ATCC VR-613 / Malish 7)
P55610 4.16e-07 56 25 6 245 4 NGR_a02110 Putative transcriptional regulatory protein y4pA Sinorhizobium fredii (strain NBRC 101917 / NGR234)
P42425 1.31e-06 54 29 8 185 1 lon2 Lon protease 2 Bacillus subtilis (strain 168)
P0DTF4 0.000629 45 33 3 112 1 cap6 CD-NTase-associated protein 6 Pseudomonas aeruginosa

  • Number of RefSeq hits:

General

Source Morganella morganii S4
Locus tag NLDBIP_13005
Feature type CDS
Gene rtcR
Product RNA repair transcriptional activator RtcR
Location 9629 - 11215 (strand: 1)
Length 1587 (nucleotides) / 528 (amino acids)

Contig

Accession ZDB_528
Length 162442 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3280
Orthogroup size 5
N. genomes 5

Actions

Genomic region

Domains

PF00158 Sigma-54 interaction domain
PF06956 Regulator of RNA terminal phosphate cyclase

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG4650 Transcription (K)
Signal transduction mechanisms (T)
KT Sigma54-dependent transcription regulator containing an AAA-type ATPase domain and a DNA-binding domain

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K14414 transcriptional regulatory protein RtcR - -

Protein Sequence

MSSAKKNVVIGVLGTVLDRRGKKANRWHKWRPSIGLCQQPDLHIDRFELVYQPGDMQTAGRVKEDIEQASPQTEVMLREVDIADPWDFEQVYTALLDFATHYPFDTENEEYLVHITTGTHVVQICWFLLTEASYLPARLIQTAPRHDARDKDPAGVYTIIDLDLSRYTQITGRFQKEQQAQVAFLKSGIATRNAGFNTMIDKIERVALRSSAPVLLTGPTGAGKSFLARRIYELRRSRHQVKGRFVEVNCATLRGDNAMSALFGHVKGAFTGAIQARGGLLKEAGGGILFLDEIAELGADEQAMLLKAIEEKRFFPYGSDHETESDFSLIAGTHRNLAQRVSEGLFREDLYARINMWTFALPGLAQRREDIEPNVDYELAKYSRDQQTRVRFDTDARQHYLAFACSPPALWRGNFRELSASVTRMATFAENGRITTALVQEETERLKNQWHSAETAVTLPAGVSEIDLFDRQQLETVIAVCRRSQTLSDAGRTLFAVSRQQKKQPNDADRLRKYLARFNLSWEQITGC

Flanking regions ( +/- flanking 50bp)

GTATGCTGACTTTATCTTTTAATATCGTCTTTTATCCGGAAAGATAAACCATGTCATCCGCAAAGAAAAACGTTGTGATTGGTGTTCTCGGCACAGTACTCGACCGGCGCGGCAAGAAAGCCAACCGCTGGCATAAATGGCGGCCGAGTATCGGGCTGTGTCAGCAGCCGGATCTGCATATTGACCGCTTTGAGCTGGTTTATCAGCCGGGTGATATGCAGACCGCAGGCCGGGTAAAAGAGGATATAGAGCAGGCCTCCCCGCAGACTGAAGTGATGCTGCGCGAGGTGGATATTGCCGACCCGTGGGATTTTGAGCAGGTATATACCGCATTGCTGGACTTTGCCACTCACTACCCGTTTGATACTGAAAATGAAGAGTATCTGGTGCATATCACCACCGGCACCCATGTGGTGCAGATTTGCTGGTTCCTGCTGACCGAAGCCAGCTATCTGCCCGCGCGTCTTATCCAGACTGCACCGCGCCATGATGCACGGGATAAAGATCCTGCCGGGGTGTATACCATTATTGACCTCGATCTCAGCCGCTATACACAGATCACCGGACGCTTTCAGAAAGAGCAGCAGGCACAGGTCGCGTTTCTGAAGTCCGGCATCGCCACACGCAATGCCGGGTTTAATACCATGATCGATAAAATCGAGCGTGTTGCTCTGCGCTCCTCCGCCCCTGTTCTGCTGACCGGGCCGACCGGTGCCGGGAAATCATTCCTGGCACGGCGGATTTATGAACTGCGCCGCAGCCGTCATCAGGTAAAAGGGCGTTTTGTGGAGGTCAACTGCGCCACGCTGCGCGGTGATAATGCCATGTCCGCCCTGTTCGGCCATGTGAAAGGGGCATTTACCGGAGCAATTCAGGCGCGCGGCGGACTGCTGAAAGAGGCGGGCGGCGGGATCCTGTTTCTGGATGAGATTGCCGAGCTGGGCGCCGACGAACAGGCAATGCTGCTGAAAGCCATTGAGGAAAAACGCTTTTTCCCTTACGGCTCGGATCATGAAACAGAGAGTGATTTTTCCCTGATCGCCGGTACACACCGCAATCTGGCACAGCGGGTCAGCGAAGGTCTGTTCCGTGAGGATTTATACGCCCGTATCAATATGTGGACCTTTGCCCTGCCCGGGCTGGCGCAGCGCCGCGAGGATATTGAGCCGAACGTGGATTATGAGCTGGCGAAATACAGCCGCGACCAGCAGACCCGTGTCCGGTTTGATACCGACGCCAGGCAGCACTACCTCGCCTTTGCCTGCTCACCACCGGCTTTGTGGCGCGGTAACTTCCGTGAACTGAGTGCCTCTGTCACGCGGATGGCAACCTTTGCAGAGAACGGGCGGATCACCACCGCGCTGGTGCAGGAAGAAACCGAACGGCTGAAGAATCAGTGGCACAGCGCGGAAACAGCGGTGACGTTGCCTGCCGGGGTGAGTGAAATTGATTTATTTGATCGTCAGCAGCTGGAAACAGTAATTGCCGTCTGCCGCCGTTCACAGACACTTTCTGATGCCGGGCGCACACTGTTTGCTGTTTCCCGTCAGCAGAAGAAACAACCCAATGATGCCGACCGGCTGCGGAAGTATCTGGCCCGTTTTAATCTCAGCTGGGAACAGATTACCGGCTGCTGAAATGACAGAGCCGGTCAGCATACACTGACCGGCTCCGGATTCGGATGTCC