Homologs in group_1001

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_05595 FBDBKF_05595 100.0 Morganella morganii S1 - Phage shock protein D
EHELCC_11995 EHELCC_11995 100.0 Morganella morganii S2 - Phage shock protein D
LHKJJB_12195 LHKJJB_12195 100.0 Morganella morganii S3 - Phage shock protein D
HKOGLL_10810 HKOGLL_10810 100.0 Morganella morganii S5 - Phage shock protein D
F4V73_RS03710 F4V73_RS03710 61.5 Morganella psychrotolerans - phage shock protein PspD
PMI_RS06630 PMI_RS06630 30.7 Proteus mirabilis HI4320 pspD phage shock protein PspD

Distribution of the homologs in the orthogroup group_1001

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1001

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella morganii S4
Locus tag NLDBIP_12335
Feature type CDS
Gene -
Product Phage shock protein D
Location 53022 - 53258 (strand: 1)
Length 237 (nucleotides) / 78 (amino acids)

Contig

Accession ZDB_527
Length 181446 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1001
Orthogroup size 7
N. genomes 7

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Genomic region

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K03971 phage shock protein D - -

Protein Sequence

MKWPDKHTLLRAGKTGAQLLTTAALAAAPGGIAAVILKSVTRPALRGAAILVLEPVIRAGMKKVIGRFTPENYETTAK

Flanking regions ( +/- flanking 50bp)

GCGCTCAACCGCCGCTTCCGTGACCTGTAATCTGTCAGACGGAGAACAGTATGAAGTGGCCGGATAAACACACCCTGCTGCGTGCCGGAAAAACCGGGGCGCAGCTGTTAACCACCGCAGCACTGGCGGCAGCACCCGGAGGTATTGCCGCGGTGATTCTGAAATCGGTTACCCGTCCTGCTCTGCGCGGGGCGGCAATACTGGTACTGGAGCCTGTTATCCGTGCCGGTATGAAAAAAGTGATTGGCCGTTTTACACCGGAGAATTATGAAACGACTGCAAAATGAGCTGAGTGCCCTCGTCAACCGGGGTCTGGATCGTCATCTTCGTCTTGCCG