Homologs in group_3110

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_19715 FBDBKF_19715 100.0 Morganella morganii S1 parB Chromosome partitioning protein ParB
EHELCC_10810 EHELCC_10810 100.0 Morganella morganii S2 parB Chromosome partitioning protein ParB
LHKJJB_10200 LHKJJB_10200 100.0 Morganella morganii S3 parB Chromosome partitioning protein ParB
HKOGLL_16365 HKOGLL_16365 100.0 Morganella morganii S5 parB Chromosome partitioning protein ParB
PMI_RS13000 PMI_RS13000 100.0 Proteus mirabilis HI4320 - hypothetical protein

Distribution of the homologs in the orthogroup group_3110

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3110

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella morganii S4
Locus tag NLDBIP_11155
Feature type CDS
Gene parB
Product Chromosome partitioning protein ParB
Location 178559 - 180208 (strand: 1)
Length 1650 (nucleotides) / 549 (amino acids)

Contig

Accession ZDB_525
Length 191527 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3110
Orthogroup size 6
N. genomes 6

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Genomic region

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1475 Cell cycle control, cell division, chromosome partitioning (D) D Chromosome segregation protein Spo0J, contains ParB-like nuclease domain

Protein Sequence

MKTDLQHKLSQALLRGNPVSSPLSDNAHVNPVSEMPMILTLEQLQPNPDNPRQGRNPRYEEIKSSIRARGLDSVPKVTKAPGSEFYIFSDGGNTRYQILSELWQETQDERFFRLHVLFKPWPGRLQCLIGHLAENEVRGELTFLEKAQGICVARSLYEETLGKKLSLRAFAQRMTADGLPVSISHISKMEDTVSVLLPYMPRLLENGLGRPQIEQLLSVRSTLKRVADSFLFQYDGPDPACDFLGCFERTCTEIDNHDVFDYDVFLDELIGRLLRECSVAGVDYERWVFELKVNKGRRSTKPELPAPVESEGDTTTAHSETVPTGMTSGFSAEDLLTEPLSSGSGQEASVSPVVEKKKSRPVVEIQTDLYGGAPVLSGDTDEADIEPVDGGSLFVTNNPEHVTPVEAPVSGHAVTALTCQDLWPVASHLDDIEHLQTQIYRTLFELGNELDLSSAFMAASGVHSPGFITLSAHSVLGRVMTVFSEPDESHDDIPDALRALLTGGYQPGMSPVLNDTQFMTWMKLMYLLRCLYAKQRDVDPDVNDEEEWE

Flanking regions ( +/- flanking 50bp)

CGGTTCAGTGATTTTCCTCAGGGATATTATTTTTAAGGGAGAGGCGAAGAATGAAAACAGATTTACAGCATAAACTCAGTCAGGCGCTTCTCAGAGGAAATCCTGTCAGTTCCCCGTTATCCGATAATGCCCACGTCAATCCGGTGTCTGAAATGCCGATGATATTAACACTTGAGCAACTTCAGCCAAATCCGGATAACCCACGTCAGGGCAGAAACCCGCGTTATGAGGAAATCAAGAGTTCCATTCGGGCACGCGGACTGGACAGTGTCCCTAAAGTCACCAAAGCACCGGGGAGTGAGTTTTATATCTTCAGTGACGGCGGAAATACGCGCTATCAGATCCTCTCTGAGTTGTGGCAGGAGACACAGGATGAGCGTTTCTTCCGCCTTCATGTGTTATTTAAACCCTGGCCGGGGCGTTTGCAGTGTTTGATTGGCCATCTGGCGGAGAATGAAGTCAGAGGGGAGTTAACGTTTCTGGAAAAAGCACAAGGGATTTGTGTGGCGCGTTCTCTGTATGAGGAAACGCTGGGGAAAAAATTATCACTCCGGGCATTCGCTCAGCGCATGACGGCGGACGGATTACCTGTCAGCATTTCACACATCAGTAAGATGGAAGATACTGTTTCTGTTTTATTACCTTATATGCCCCGTTTACTGGAAAACGGGCTGGGAAGACCCCAAATTGAGCAATTATTGTCCGTGCGTTCGACATTAAAACGGGTAGCGGATTCGTTTCTTTTTCAGTATGACGGGCCGGATCCAGCCTGTGATTTTCTGGGATGTTTTGAAAGGACATGCACAGAAATAGATAACCATGATGTTTTTGATTATGACGTGTTTCTGGATGAACTGATTGGCCGGCTACTGAGGGAGTGTTCTGTTGCCGGTGTGGATTATGAACGTTGGGTATTTGAATTGAAGGTCAATAAAGGCAGACGCAGCACAAAGCCGGAATTGCCTGCGCCGGTGGAGAGTGAGGGTGATACAACAACCGCGCATTCAGAAACCGTACCTACCGGTATGACCTCCGGTTTTTCGGCAGAGGATTTGTTAACGGAGCCCCTATCTTCTGGTTCAGGTCAGGAGGCTTCAGTATCTCCTGTCGTTGAAAAGAAAAAATCCCGTCCGGTTGTGGAGATCCAGACGGATTTATACGGCGGGGCACCTGTGCTGAGCGGGGATACCGACGAGGCGGATATTGAGCCTGTCGATGGCGGAAGTCTGTTTGTCACGAATAACCCGGAGCATGTCACACCGGTGGAGGCGCCCGTCTCCGGTCATGCGGTGACGGCACTGACGTGTCAGGATCTCTGGCCGGTGGCATCACATCTGGATGATATTGAACATCTTCAGACGCAAATTTACCGTACTTTGTTTGAATTAGGGAATGAGCTGGATTTATCTTCCGCCTTTATGGCGGCTTCCGGGGTGCATTCTCCGGGATTTATTACGTTGTCAGCACATTCGGTGCTGGGGCGTGTGATGACGGTTTTCTCAGAACCTGATGAGTCCCATGATGATATTCCGGATGCCCTCAGAGCCCTGCTGACGGGGGGATATCAGCCCGGTATGTCGCCGGTATTGAATGATACCCAGTTTATGACATGGATGAAACTGATGTACTTGTTGCGTTGTTTGTATGCCAAACAAAGAGATGTTGATCCGGATGTGAATGATGAAGAGGAATGGGAATAAAAGCACCGCCTTATCGCCGGAGGCGCTGGCGTGTTATCTGCCCCTGAACC