Homologs in group_117

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10 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_03950 FBDBKF_03950 100.0 Morganella morganii S1 - TIGR03756 family integrating conjugative element protein
FBDBKF_16775 FBDBKF_16775 54.6 Morganella morganii S1 - Integrating conjugative element protein
EHELCC_06585 EHELCC_06585 100.0 Morganella morganii S2 - TIGR03756 family integrating conjugative element protein
EHELCC_10685 EHELCC_10685 54.6 Morganella morganii S2 - Integrating conjugative element protein
NLDBIP_11030 NLDBIP_11030 54.6 Morganella morganii S4 - Integrating conjugative element protein
LHKJJB_06445 LHKJJB_06445 100.0 Morganella morganii S3 - TIGR03756 family integrating conjugative element protein
LHKJJB_10325 LHKJJB_10325 54.6 Morganella morganii S3 - Integrating conjugative element protein
HKOGLL_04485 HKOGLL_04485 100.0 Morganella morganii S5 - TIGR03756 family integrating conjugative element protein
HKOGLL_16490 HKOGLL_16490 54.6 Morganella morganii S5 - Integrating conjugative element protein
PMI_RS12705 PMI_RS12705 100.0 Proteus mirabilis HI4320 - TIGR03756 family integrating conjugative element protein

Distribution of the homologs in the orthogroup group_117

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_117

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella morganii S4
Locus tag NLDBIP_06910
Feature type CDS
Gene -
Product TIGR03756 family integrating conjugative element protein
Location 58451 - 59425 (strand: 1)
Length 975 (nucleotides) / 324 (amino acids)

Contig

Accession ZDB_522
Length 269640 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_117
Orthogroup size 11
N. genomes 6

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Genomic region

Domains

PF06834 TraU protein

Protein Sequence

MTRQSHRRRLAGALLLGCSLVPVAEASLSTATLVASAASPSCISWRISGICYWLKCGWGGCRIRTSVRVSHFIPQAVVSAYHAPGENPWREMSLVSGAAGGIENAVTGVLSGVSAGGGNSEQKFEAKRKTALHFFYADAIGHPATTLIGGSIPGYSCDSAATPLFPYYLSTLDSVPWRLGVPEMAYPEAIIPGKREIGGQSRGNMWGNLYPRSGFVNQQDGDKAAAVVAQRVADIMTRTGQAHTYVPLKGNRRDGYWPPDAVTENTGTKNHKWQRLSPGLKNSCAVFPDEGGAQAQDGNYAWALWQPYSCCKRMGQKFLYSTTF

Flanking regions ( +/- flanking 50bp)

GTGACGCAGATACAGCAGTACCGGGAACAACAGGAAGGAGGAGGTCAACCATGACCCGACAATCACATCGCCGGCGTCTGGCGGGGGCTTTGTTACTCGGTTGTTCACTGGTGCCGGTGGCGGAAGCCAGTCTGAGTACCGCCACTCTGGTCGCTTCTGCGGCCTCACCGTCGTGTATCAGCTGGCGTATCAGCGGGATTTGCTACTGGCTGAAGTGTGGCTGGGGCGGCTGCCGTATCCGGACATCTGTCCGGGTGTCACATTTTATTCCGCAGGCGGTGGTCTCGGCCTACCATGCCCCGGGTGAAAACCCGTGGCGGGAAATGTCACTGGTCAGCGGGGCGGCCGGCGGGATTGAAAATGCCGTGACCGGCGTGCTGAGCGGGGTATCTGCCGGGGGCGGAAACAGTGAACAGAAGTTTGAGGCAAAACGTAAAACCGCCCTGCACTTTTTTTATGCGGATGCTATCGGTCATCCGGCAACCACCCTTATCGGCGGCAGTATTCCGGGGTATTCCTGTGACAGCGCAGCCACACCGCTGTTTCCTTATTACCTGAGCACGCTCGACAGTGTGCCGTGGCGGCTCGGTGTGCCGGAAATGGCGTATCCGGAAGCGATAATTCCCGGGAAACGGGAAATCGGGGGGCAGAGCCGGGGCAACATGTGGGGAAATCTCTATCCGCGCAGCGGTTTTGTCAACCAGCAGGACGGGGATAAAGCGGCGGCTGTGGTGGCGCAGCGCGTGGCAGATATTATGACCCGCACCGGGCAGGCGCATACCTATGTGCCCCTGAAAGGCAACCGCCGGGATGGCTATTGGCCGCCGGACGCGGTGACGGAGAATACCGGGACAAAAAACCATAAATGGCAGCGCCTGTCGCCGGGGCTGAAAAACAGCTGTGCGGTGTTTCCGGATGAGGGCGGAGCACAGGCACAGGACGGTAATTATGCCTGGGCATTGTGGCAGCCGTACAGCTGCTGCAAGCGCATGGGGCAAAAATTTCTGTACAGCACAACGTTTTAAGCAGGGATTTTAAGATGATGAAAGCAAAACGACACACGTTTTTTCCGCCG