Homologs in group_3484

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4 homologs were identified in 4 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_16775 FBDBKF_16775 100.0 Morganella morganii S1 - Integrating conjugative element protein
EHELCC_10685 EHELCC_10685 100.0 Morganella morganii S2 - Integrating conjugative element protein
LHKJJB_10325 LHKJJB_10325 100.0 Morganella morganii S3 - Integrating conjugative element protein
HKOGLL_16490 HKOGLL_16490 100.0 Morganella morganii S5 - Integrating conjugative element protein

Distribution of the homologs in the orthogroup group_3484

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3484

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella morganii S4
Locus tag NLDBIP_11030
Feature type CDS
Gene -
Product Integrating conjugative element protein
Location 157063 - 158001 (strand: 1)
Length 939 (nucleotides) / 312 (amino acids)
In genomic island -

Contig

Accession ZDB_525
Length 191527 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3484
Orthogroup size 5
N. genomes 5

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Genomic region

Domains

PF06834 TraU protein

Protein Sequence

MMRRFFSRSVLVLICTVPPVTAGSLNSLQIVQSALSPSCMEYKITGMCYWLFCTLYGCTVKTAVKVRHYIPDAVVSAYNQTGGNPWSEMAFTGTGIAGLAEGGGANEQKRPGHKINLRFKNADVIGHPALASPLFNQFSGAMGMTCAGGGVPLMPYFLSTLDGLAWRSGLPESFYPEALTPGMRDIGSAVRGDMWGSLYPRSGFVTQTHDYKAAAVTAQRAADIVTRSGQPHVYQPLRASARPGYWPPEPVRENTRNHKWQRLTPSPSSSCATFPESRTPVATDGAYAWALWRPYSCCKRRGQRLLYSMNFQ

Flanking regions ( +/- flanking 50bp)

GCTGATGTGGCAGTGGCGGAGCAATTGCTGGCTGAGTTCCGGGAGGCGCGATGATGCGCCGGTTTTTCTCCCGGAGTGTGCTGGTACTGATATGCACCGTGCCGCCGGTGACGGCGGGATCACTGAATTCGTTACAGATAGTGCAGAGTGCGCTGTCGCCGTCGTGTATGGAGTACAAAATCACAGGTATGTGCTACTGGCTGTTCTGCACCCTGTACGGCTGCACGGTGAAAACCGCTGTCAAAGTGCGGCACTACATTCCCGATGCGGTGGTCTCGGCCTATAACCAGACCGGCGGAAATCCGTGGTCTGAAATGGCTTTTACCGGAACCGGGATTGCCGGTCTGGCCGAAGGTGGCGGGGCGAATGAGCAGAAGCGTCCGGGGCATAAAATCAATCTGCGGTTTAAAAATGCGGATGTAATTGGTCATCCGGCGCTGGCCTCACCGCTGTTTAATCAGTTTTCCGGAGCGATGGGAATGACCTGTGCCGGGGGTGGTGTGCCGCTGATGCCGTATTTTCTCAGCACACTGGATGGCCTCGCCTGGCGCTCCGGGTTGCCCGAATCCTTTTATCCGGAAGCACTGACGCCGGGAATGCGGGACATCGGTTCTGCCGTGCGCGGTGATATGTGGGGCAGTCTCTATCCGCGCAGCGGGTTTGTGACACAGACGCACGACTACAAGGCTGCCGCCGTGACGGCACAACGGGCGGCAGATATCGTGACCCGTTCCGGCCAGCCTCATGTCTATCAGCCGCTGCGTGCGTCAGCGCGTCCGGGCTACTGGCCGCCGGAGCCGGTCCGGGAAAATACCCGCAATCACAAATGGCAGCGGCTGACACCGTCGCCGTCCTCTTCCTGCGCTACTTTTCCGGAAAGCCGGACACCGGTTGCCACCGATGGCGCTTATGCCTGGGCGCTGTGGCGGCCTTACAGTTGCTGCAAACGGCGTGGTCAGCGGCTTTTATACAGTATGAATTTTCAGTAACAGGGAACGTTATGATGAACACGAATTTACGGCTCAGTACCGTGGTACTG