Homologs in group_3240

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4 homologs were identified in 4 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_04730 FBDBKF_04730 100.0 Morganella morganii S1 - Colicin-E3
EHELCC_06020 EHELCC_06020 100.0 Morganella morganii S2 - Colicin-E3
LHKJJB_03220 LHKJJB_03220 100.0 Morganella morganii S3 - Colicin-E3
HKOGLL_06695 HKOGLL_06695 100.0 Morganella morganii S5 - Colicin-E3

Distribution of the homologs in the orthogroup group_3240

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3240

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella morganii S4
Locus tag NLDBIP_06340
Feature type CDS
Gene -
Product Colicin-E3
Location 250100 - 250465 (strand: 1)
Length 366 (nucleotides) / 121 (amino acids)

Contig

Accession ZDB_521
Length 325332 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3240
Orthogroup size 5
N. genomes 5

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Genomic region

Protein Sequence

MSDKHDPSDGTPHIKVTVYSTPCESEEWPSIDNFNVFQYPGRNRPSILKEYLDEARREPERMVYLSSAAAVGRSALIFPVNGTLAATIASWIQSFDFSALLAGLRDTLPLAGRITGIAALL

Flanking regions ( +/- flanking 50bp)

TTACAGACATAGCGAATTAAACGGATTTTTAAATAAAAAAGGAGCTTTTAATGTCAGATAAGCATGACCCTTCAGACGGTACGCCCCATATTAAAGTTACTGTATACAGCACCCCTTGTGAGAGTGAAGAGTGGCCGTCTATTGATAATTTTAACGTATTCCAGTATCCCGGTCGCAACCGCCCGTCCATCCTGAAAGAATATCTCGATGAAGCACGCAGGGAACCGGAGCGGATGGTCTATCTCAGCAGTGCCGCAGCAGTCGGCCGGAGTGCATTAATTTTTCCGGTTAACGGCACTCTGGCCGCAACCATTGCATCCTGGATTCAGTCTTTCGATTTCAGTGCTCTGCTGGCAGGACTGAGAGATACATTACCCCTGGCGGGGCGGATAACCGGTATTGCCGCATTATTGTGACCGACTAAAATGGGGAACGCTGAATTATATCAGGGTGCCGGACCCCTTAT