Homologs in group_94

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11 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_10890 FBDBKF_10890 100.0 Morganella morganii S1 arsR DNA-binding transcriptional regulator, ArsR family
FBDBKF_20405 FBDBKF_20405 55.1 Morganella morganii S1 arsR DNA-binding transcriptional regulator, ArsR family
EHELCC_05335 EHELCC_05335 100.0 Morganella morganii S2 arsR DNA-binding transcriptional regulator, ArsR family
EHELCC_19730 EHELCC_19730 55.1 Morganella morganii S2 arsR DNA-binding transcriptional regulator, ArsR family
NLDBIP_19710 NLDBIP_19710 55.1 Morganella morganii S4 arsR DNA-binding transcriptional regulator, ArsR family
LHKJJB_02535 LHKJJB_02535 100.0 Morganella morganii S3 arsR DNA-binding transcriptional regulator, ArsR family
LHKJJB_19675 LHKJJB_19675 55.1 Morganella morganii S3 arsR DNA-binding transcriptional regulator, ArsR family
HKOGLL_15915 HKOGLL_15915 100.0 Morganella morganii S5 arsR DNA-binding transcriptional regulator, ArsR family
HKOGLL_19590 HKOGLL_19590 55.1 Morganella morganii S5 arsR DNA-binding transcriptional regulator, ArsR family
F4V73_RS08480 F4V73_RS08480 74.7 Morganella psychrotolerans - winged helix-turn-helix domain-containing protein
PMI_RS06185 PMI_RS06185 53.1 Proteus mirabilis HI4320 - ArsR family transcriptional regulator

Distribution of the homologs in the orthogroup group_94

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_94

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P96683 3.54e-44 150 37 2 226 4 ydfF Uncharacterized HTH-type transcriptional regulator YdfF Bacillus subtilis (strain 168)
P9WMI9 5.99e-06 47 33 1 87 1 cmtR HTH-type transcriptional regulator CmtR Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WMI8 5.99e-06 47 33 1 87 3 cmtR HTH-type transcriptional regulator CmtR Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
P67732 5.99e-06 47 33 1 87 3 cmtR HTH-type transcriptional regulator CmtR Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)

  • Number of RefSeq hits:

General

Source Morganella morganii S4
Locus tag NLDBIP_05655
Feature type CDS
Gene arsR
Product DNA-binding transcriptional regulator, ArsR family
Location 92867 - 93562 (strand: 1)
Length 696 (nucleotides) / 231 (amino acids)

Contig

Accession ZDB_521
Length 325332 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_94
Orthogroup size 12
N. genomes 7

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Genomic region

Domains

PF12840 Helix-turn-helix domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0640 Transcription (K) K DNA-binding transcriptional regulator, ArsR family

Protein Sequence

MSEEHAPELETALAGVAAALADPSRIRMLCALMDGRAWTATELSIAADISASTASAHLAKLVAVKLIICIPQGRHRYYQLAGLNVAEIIEKMMNLTGIPVTAAIRKSSAPPHLRQARTCYDHLAGETAVAVYDAMQEKGWITADGTTLTTAGESALTALGLPAAHTVKRVFCCGCLDWSERRFHLGGYLGAALFTHCEQQGWLTRTPGYREVTITGKGKKQFRQWLGIQIP

Flanking regions ( +/- flanking 50bp)

GAAATCACCCGTGAATATGACTTCGGGCAGGAATAATCTGCGGAGCTGATATGTCAGAAGAACACGCACCAGAGTTAGAAACTGCGCTTGCCGGTGTGGCTGCGGCACTGGCTGATCCGTCCCGTATCCGCATGCTCTGCGCCCTGATGGACGGCAGAGCATGGACAGCAACTGAACTGAGCATTGCCGCGGATATCAGTGCCTCCACCGCCAGCGCCCATCTGGCAAAACTGGTCGCCGTAAAGCTGATTATCTGTATTCCGCAGGGGCGTCACCGCTATTATCAGCTGGCCGGATTAAACGTGGCCGAAATCATCGAAAAAATGATGAATCTCACCGGTATTCCGGTAACAGCCGCCATCCGCAAATCCTCCGCCCCGCCGCATTTACGGCAGGCCAGAACCTGTTATGACCATCTGGCCGGGGAAACGGCGGTGGCTGTGTATGATGCGATGCAGGAAAAAGGCTGGATAACCGCTGACGGCACCACGCTGACAACGGCGGGAGAATCTGCGCTGACCGCACTCGGGCTGCCTGCCGCTCACACGGTAAAACGGGTTTTCTGCTGCGGCTGTCTGGACTGGAGTGAACGCCGGTTTCATCTCGGCGGCTATCTGGGTGCCGCCCTCTTCACTCACTGTGAGCAACAGGGCTGGCTGACCCGCACACCGGGCTACCGTGAAGTGACAATTACCGGAAAAGGGAAAAAACAATTCCGGCAATGGTTAGGGATTCAGATCCCGTAATTATGAACTTCTGACCAGTAATAACGATAATTTACGGGCAAACGGCAGAA