Homologs in group_94

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11 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_10890 FBDBKF_10890 55.1 Morganella morganii S1 arsR DNA-binding transcriptional regulator, ArsR family
FBDBKF_20405 FBDBKF_20405 100.0 Morganella morganii S1 arsR DNA-binding transcriptional regulator, ArsR family
EHELCC_05335 EHELCC_05335 55.1 Morganella morganii S2 arsR DNA-binding transcriptional regulator, ArsR family
EHELCC_19730 EHELCC_19730 100.0 Morganella morganii S2 arsR DNA-binding transcriptional regulator, ArsR family
NLDBIP_05655 NLDBIP_05655 55.1 Morganella morganii S4 arsR DNA-binding transcriptional regulator, ArsR family
NLDBIP_19710 NLDBIP_19710 100.0 Morganella morganii S4 arsR DNA-binding transcriptional regulator, ArsR family
LHKJJB_02535 LHKJJB_02535 55.1 Morganella morganii S3 arsR DNA-binding transcriptional regulator, ArsR family
HKOGLL_15915 HKOGLL_15915 55.1 Morganella morganii S5 arsR DNA-binding transcriptional regulator, ArsR family
HKOGLL_19590 HKOGLL_19590 100.0 Morganella morganii S5 arsR DNA-binding transcriptional regulator, ArsR family
F4V73_RS08480 F4V73_RS08480 56.5 Morganella psychrotolerans - winged helix-turn-helix domain-containing protein
PMI_RS06185 PMI_RS06185 63.8 Proteus mirabilis HI4320 - ArsR family transcriptional regulator

Distribution of the homologs in the orthogroup group_94

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_94

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P96683 2.17e-42 145 38 3 213 4 ydfF Uncharacterized HTH-type transcriptional regulator YdfF Bacillus subtilis (strain 168)

  • Number of RefSeq hits:

General

Source Morganella morganii S3
Locus tag LHKJJB_19675
Feature type CDS
Gene arsR
Product DNA-binding transcriptional regulator, ArsR family
Location 2980 - 3603 (strand: 1)
Length 624 (nucleotides) / 207 (amino acids)

Contig

Accession ZDB_397
Length 4023 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_94
Orthogroup size 12
N. genomes 7

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Genomic region

Domains

PF01022 Bacterial regulatory protein, arsR family

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0640 Transcription (K) K DNA-binding transcriptional regulator, ArsR family

Protein Sequence

MSDISRVKILSALMDGRAWTATELSSVANISASTASSHLSKLLDCQLITVVAQGKHRYFRLAGKDIAELMESMMGISLNHGVHAKVSTPVHLRKARTCYDHLAGEVAVKIYDSLCQQQWITENGSMITLSGIQYFHEMGIDVPSKHSRKICCACLDWSERRFHLGGYVGAALFSLYESKGWLTRHLGYREVTITEKGYAAFKTHFHI

Flanking regions ( +/- flanking 50bp)

TACGAAAAGAGGTTACCTTTGAGTCCTCAATAGCCGCGATAGGGGCGGCTATGTCTGACATTTCACGAGTTAAAATACTCAGTGCTTTGATGGATGGGCGAGCTTGGACGGCCACTGAGCTAAGTTCTGTGGCGAATATATCAGCTTCAACGGCGAGCAGTCATTTATCTAAATTATTAGATTGCCAGCTAATCACAGTAGTAGCTCAAGGCAAGCATCGTTATTTTCGGCTAGCAGGAAAAGATATTGCTGAATTGATGGAAAGTATGATGGGGATCTCCTTAAACCATGGCGTACATGCCAAAGTTTCCACGCCAGTGCATTTACGAAAAGCACGTACTTGCTATGATCATTTAGCTGGCGAAGTTGCCGTTAAGATCTATGATTCCCTTTGTCAACAGCAATGGATCACTGAAAATGGTTCAATGATCACATTAAGTGGTATTCAATATTTTCATGAAATGGGAATTGACGTTCCTTCCAAACATTCACGTAAAATCTGTTGTGCGTGTTTAGATTGGAGTGAACGCCGTTTCCATTTAGGTGGGTACGTTGGAGCCGCATTATTTTCGCTTTATGAATCTAAAGGGTGGTTAACTCGACATCTTGGTTACCGTGAAGTTACCATCACGGAAAAAGGTTATGCTGCTTTTAAGACCCACTTTCACATTTAAGTTGTTTTTCTAATCCGCATATGATCAATTCAAGGCCGAATAAGAAGGCT