Homologs in group_2708

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_06715 FBDBKF_06715 100.0 Morganella morganii S1 - Molecular chaperone
EHELCC_04255 EHELCC_04255 100.0 Morganella morganii S2 - Molecular chaperone
LHKJJB_10085 LHKJJB_10085 100.0 Morganella morganii S3 - Molecular chaperone
HKOGLL_08890 HKOGLL_08890 100.0 Morganella morganii S5 - Molecular chaperone
F4V73_RS00865 F4V73_RS00865 52.8 Morganella psychrotolerans - molecular chaperone

Distribution of the homologs in the orthogroup group_2708

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2708

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P21646 1.47e-56 182 38 1 234 3 mrkB Chaperone protein MrkB Klebsiella pneumoniae
P45991 5.65e-38 135 35 6 238 3 hifB Chaperone protein HifB Haemophilus influenzae
P35757 5.66e-37 132 35 6 238 3 hifB Chaperone protein HifB Haemophilus influenzae
P33409 1.88e-32 121 34 8 215 3 fimB Chaperone protein FimB/FhaD Bordetella pertussis (strain Tohama I / ATCC BAA-589 / NCTC 13251)
P33342 7.56e-30 114 30 6 225 2 yehC Probable fimbrial chaperone YehC Escherichia coli (strain K12)
P33128 2.26e-27 108 31 6 229 1 yadV Probable fimbrial chaperone YadV Escherichia coli (strain K12)
Q8X5K6 4.36e-27 107 33 8 228 2 lpfB Probable fimbrial chaperone LpfB Escherichia coli O157:H7
P43661 1.34e-26 105 33 8 217 3 lpfB Chaperone protein LpfB Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P59590 1.32e-24 100 29 8 227 3 fimC Chaperone protein FimC Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P31697 1.03e-23 98 30 8 223 1 fimC Chaperone protein FimC Escherichia coli (strain K12)
P62609 5.2e-21 90 28 8 222 1 focC Chaperone protein FocC Escherichia coli
P62610 5.2e-21 90 28 8 222 3 focC Chaperone protein FocC Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P25402 7.03e-21 90 31 10 229 3 fanE Chaperone protein FanE Escherichia coli
P15319 1.9e-20 89 29 10 234 1 papD Chaperone protein PapD Escherichia coli
P37923 8.18e-20 87 30 8 212 3 fimC Chaperone protein FimC Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P77249 3.68e-19 85 30 9 228 2 sfmC Probable fimbrial chaperone SfmC Escherichia coli (strain K12)
P75856 2.2e-17 81 27 7 208 2 elfD Probable fimbrial chaperone protein ElfD Escherichia coli (strain K12)
P42914 2.41e-17 81 27 7 224 2 yraI Probable fimbrial chaperone YraI Escherichia coli (strain K12)
P53520 2.86e-17 81 27 10 237 3 pmfD Chaperone protein PmfD Proteus mirabilis (strain HI4320)
Q8X5E4 4.62e-17 80 27 7 208 2 elfD Probable fimbrial chaperone protein ElfD Escherichia coli O157:H7
Q05433 8.7e-16 77 28 10 239 3 clpE Chaperone protein ClpE Escherichia coli
P25401 1.25e-15 77 28 10 239 1 faeE Chaperone protein FaeE Escherichia coli
P40876 5.65e-15 74 27 5 217 2 ycbF Uncharacterized fimbrial chaperone YcbF Escherichia coli (strain K12)
P77599 4.62e-13 69 25 7 194 2 yfcS Probable fimbrial chaperone YfcS Escherichia coli (strain K12)
P75749 5.24e-11 63 26 8 189 3 ybgP Uncharacterized fimbrial chaperone YbgP Escherichia coli (strain K12)
P46004 2.67e-09 59 25 6 212 3 aggD Chaperone protein AggD Escherichia coli
P77616 3.1e-09 58 27 14 229 3 yqiH Uncharacterized fimbrial chaperone YqiH Escherichia coli (strain K12)
P26926 1e-08 57 25 7 220 1 caf1M Chaperone protein caf1M Yersinia pestis
P53516 1.76e-06 50 26 6 175 3 afaB Chaperone protein AfaB Escherichia coli
P69966 7.36e-06 49 21 7 206 3 psaB Chaperone protein PsaB Yersinia pseudotuberculosis serotype I (strain IP32953)
P69965 7.36e-06 49 21 7 206 3 psaB Chaperone protein PsaB Yersinia pestis
P53519 9.82e-06 48 21 10 237 3 cssC Chaperone protein CssC Escherichia coli
P42183 0.000268 42 31 5 100 3 prsD Chaperone protein PrsD (Fragment) Escherichia coli

  • Number of RefSeq hits:

General

Source Morganella morganii S4
Locus tag NLDBIP_04255
Feature type CDS
Gene -
Product Molecular chaperone
Location 179132 - 179836 (strand: 1)
Length 705 (nucleotides) / 234 (amino acids)

Contig

Accession ZDB_520
Length 336657 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2708
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain
PF02753 Pili assembly chaperone PapD, C-terminal domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3121 Extracellular structures (W) W P pilus assembly protein, chaperone PapD

Protein Sequence

MKSYLLFIGYFISAFSFADGISTNSTRYIYPEGAHDITARINNESATAAFVQYWLDPGDSEALPAKLPVTPFELTPPVSCINPGAEQILRIRLTDKNSMPSDRKSLWRLNILDIPPVSETSSLKEKNSGQLAVRSRFKVFYRPAGLSDRNTASQRVSFQSGSHSIRVNNTSPYHITITEITLADKKQILHKSFMLQPKSSSEIAVKRAVKRGDHLTVSNINDQGGNVTFTATAE

Flanking regions ( +/- flanking 50bp)

CAGTAATAATACCTGTCTGTGTATTTCTTCGTGCAAAGCGGGGAAACAAAATGAAATCATATCTGTTATTTATCGGGTATTTTATCAGTGCCTTTTCTTTCGCTGACGGTATCAGTACGAATAGCACACGGTATATTTATCCGGAAGGTGCTCACGATATTACGGCACGGATAAATAATGAATCTGCCACTGCGGCATTTGTTCAGTACTGGCTTGACCCGGGCGATTCCGAGGCTCTGCCCGCGAAATTGCCGGTCACGCCGTTTGAGCTGACCCCGCCTGTTTCATGCATCAATCCCGGAGCAGAACAGATTTTACGTATACGGCTGACAGATAAAAACAGTATGCCGTCAGACAGAAAAAGCCTGTGGCGGCTGAATATTCTTGATATTCCGCCGGTCAGTGAAACATCATCGCTGAAGGAAAAAAACTCGGGACAACTGGCCGTCCGTTCACGGTTTAAAGTCTTTTACCGCCCTGCCGGATTAAGTGACAGAAACACTGCCTCACAGCGGGTGTCATTTCAGTCCGGCAGTCATTCAATACGGGTCAATAATACATCGCCGTACCACATTACCATTACGGAAATCACCCTGGCGGATAAAAAACAAATACTGCATAAATCCTTTATGCTGCAACCGAAAAGCAGTTCGGAAATAGCGGTAAAAAGAGCGGTTAAACGCGGTGACCATCTGACTGTCAGTAATATCAATGATCAGGGCGGCAACGTGACCTTTACCGCCACAGCAGAATAACGCTCACCCGTTTAATTATTTTTCCGGTTCAATATCCGGCCGCACAATCG