Homologs in group_266

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7 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_07305 FBDBKF_07305 100.0 Morganella morganii S1 pqiA membrane integrity-associated transporter subunit PqiA
EHELCC_03665 EHELCC_03665 100.0 Morganella morganii S2 pqiA membrane integrity-associated transporter subunit PqiA
LHKJJB_09495 LHKJJB_09495 100.0 Morganella morganii S3 pqiA membrane integrity-associated transporter subunit PqiA
HKOGLL_09480 HKOGLL_09480 100.0 Morganella morganii S5 pqiA membrane integrity-associated transporter subunit PqiA
F4V73_RS01490 F4V73_RS01490 88.7 Morganella psychrotolerans pqiA membrane integrity-associated transporter subunit PqiA
PMI_RS03815 PMI_RS03815 66.9 Proteus mirabilis HI4320 pqiA membrane integrity-associated transporter subunit PqiA
PMI_RS04920 PMI_RS04920 31.5 Proteus mirabilis HI4320 - membrane integrity lipid transport subunit YebS

Distribution of the homologs in the orthogroup group_266

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_266

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0AFM1 0.0 516 61 1 418 3 pqiA Intermembrane transport protein PqiA Shigella flexneri
P0AFL9 0.0 516 61 1 418 1 pqiA Intermembrane transport protein PqiA Escherichia coli (strain K12)
P0AFM0 0.0 516 61 1 418 3 pqiA Intermembrane transport protein PqiA Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0AD03 1.87e-46 168 30 8 409 1 yebS Intermembrane transport protein YebS Escherichia coli (strain K12)
P0AD03 4.6e-07 55 21 1 186 1 yebS Intermembrane transport protein YebS Escherichia coli (strain K12)
P0AD04 1.87e-46 168 30 8 409 3 yebS Intermembrane transport protein YebS Escherichia coli O157:H7
P0AD04 4.6e-07 55 21 1 186 3 yebS Intermembrane transport protein YebS Escherichia coli O157:H7
P44287 2.05e-45 165 28 10 414 3 HI_1671 Uncharacterized protein HI_1671 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)

  • Number of RefSeq hits:

General

Source Morganella morganii S4
Locus tag NLDBIP_03665
Feature type CDS
Gene pqiA
Product membrane integrity-associated transporter subunit PqiA
Location 39793 - 41070 (strand: -1)
Length 1278 (nucleotides) / 425 (amino acids)
In genomic island -

Contig

Accession ZDB_520
Length 336657 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_266
Orthogroup size 8
N. genomes 7

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Genomic region

Domains

PF04403 Paraquat-inducible protein A

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2995 Cell wall/membrane/envelope biogenesis (M) M Intermembrane transporter PqiABC subunit PqiA

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K03808 intermembrane transport protein PqiA/LetA - -

Protein Sequence

MCVHHSHDSVTVLCPQCDLVVEIPELERGTKAECPRCHTHLAARWREPRRQPLMYALSGLVMFVLAGMFPFVSMKVAGIESEITLYQIPSVMFGDNYGGLALFFMGFVLAVPAFCLFAITLLCSGIRLPPSLAIPVTRLLFRLRAWCMAEIFLAGVLVSFVKLMAYGDIGLGVSFLPYCLFCVMQVRAFQCLDKHWVWQRIAPRPPLPVALEAGKGGLCQGVRLCGTCQAILPADMHECPRCSSRGHARRPNSLQLTMALLFTSVILYIPANLMPIMITESLGSDFGSTIMAGVILLWGDGSYPVAMVIFIASIMVPSLKMLAIGWLCLDAKGHGWRDPGRMHFIYEIVEFVGRWSMIDVFVIAVLAALVRMGRLMSIYPDIGVILFAMVVILTMIAAEMFDPRLTWDRLEKKRAESAKEPQVER

Flanking regions ( +/- flanking 50bp)

TGCAGAGCGGGAACTGATCCCGCCTGTGATTTTGGAGAAATAACGAAACAGTGTGTGTTCATCATTCACATGATTCAGTCACGGTGCTGTGTCCGCAGTGCGACCTGGTGGTGGAAATCCCTGAGCTGGAACGGGGAACCAAAGCCGAATGTCCGCGCTGCCACACCCACCTGGCCGCCCGCTGGCGTGAACCGCGCCGCCAGCCGCTGATGTATGCACTCAGCGGCCTGGTGATGTTTGTACTCGCCGGGATGTTTCCGTTTGTCTCGATGAAAGTGGCAGGTATTGAAAGCGAAATCACGCTTTATCAGATACCGTCTGTGATGTTCGGGGATAACTACGGCGGGCTGGCACTGTTCTTTATGGGATTTGTGCTGGCGGTACCGGCCTTCTGCCTGTTTGCCATTACCTTACTGTGCAGCGGGATCCGTCTGCCGCCTTCGCTGGCCATTCCGGTCACGCGGCTGCTGTTCCGGCTGCGTGCCTGGTGTATGGCGGAGATTTTCCTCGCCGGTGTGCTGGTCAGTTTCGTGAAACTGATGGCGTACGGGGATATCGGGCTGGGCGTGAGTTTTCTGCCATATTGTCTGTTCTGTGTGATGCAGGTGCGGGCATTCCAGTGCCTGGATAAACACTGGGTCTGGCAGCGGATTGCACCGCGTCCGCCGCTGCCGGTGGCGCTGGAGGCAGGAAAAGGCGGTTTGTGTCAGGGGGTGCGGCTGTGCGGTACCTGTCAGGCGATTCTGCCGGCAGATATGCATGAGTGTCCGCGCTGCAGCAGCCGGGGTCATGCCCGGCGGCCGAACAGTTTACAGCTGACCATGGCACTGCTGTTTACCTCCGTGATTTTATATATCCCGGCAAACCTGATGCCGATTATGATCACCGAATCCCTCGGCAGTGATTTCGGCTCGACCATTATGGCCGGGGTGATTTTGCTGTGGGGGGATGGCTCTTATCCGGTGGCGATGGTGATCTTTATCGCCAGTATCATGGTGCCGAGCCTGAAAATGCTGGCCATCGGCTGGCTGTGTCTGGATGCCAAAGGTCACGGCTGGCGTGATCCCGGCCGGATGCACTTTATTTATGAAATCGTGGAGTTTGTCGGACGCTGGTCCATGATTGATGTGTTTGTGATAGCCGTACTGGCGGCACTGGTGCGGATGGGGCGTCTGATGAGCATCTATCCGGATATCGGTGTGATTTTATTTGCGATGGTGGTCATTCTGACAATGATTGCCGCCGAAATGTTCGACCCGCGCCTGACGTGGGATCGGCTTGAAAAAAAACGGGCGGAGAGTGCTAAGGAGCCTCAGGTTGAACGATAAAACTGATGATTTGACAGAAGCGAAGGTCAGCAAACTGAAAAGCTGGTCAC