Homologs in group_518

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_01095 FBDBKF_01095 100.0 Morganella morganii S1 sseB Enhanced serine sensitivity protein SseB
EHELCC_00450 EHELCC_00450 100.0 Morganella morganii S2 sseB Enhanced serine sensitivity protein SseB
LHKJJB_04525 LHKJJB_04525 100.0 Morganella morganii S3 sseB Enhanced serine sensitivity protein SseB
HKOGLL_02520 HKOGLL_02520 100.0 Morganella morganii S5 sseB Enhanced serine sensitivity protein SseB
F4V73_RS07165 F4V73_RS07165 77.9 Morganella psychrotolerans - enhanced serine sensitivity protein SseB C-terminal domain-containing protein
PMI_RS09140 PMI_RS09140 47.8 Proteus mirabilis HI4320 - enhanced serine sensitivity protein SseB C-terminal domain-containing protein

Distribution of the homologs in the orthogroup group_518

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_518

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0AFZ2 4.63e-17 77 36 4 129 3 sseB Protein SseB Shigella flexneri
P0AFZ1 4.63e-17 77 36 4 129 4 sseB Protein SseB Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Morganella morganii S4
Locus tag NLDBIP_03010
Feature type CDS
Gene sseB
Product Enhanced serine sensitivity protein SseB
Location 576231 - 576653 (strand: -1)
Length 423 (nucleotides) / 140 (amino acids)

Contig

Accession ZDB_519
Length 680340 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_518
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF14581 SseB protein C-terminal domain

Protein Sequence

MADILPVQEVMIEQGSALLLSVPENKPDAVLDALTGVFKQHKPVRRAFWVMAAEKNNTVPDEPVLLIVLELSEEQEADTVIRQAAEAAMEHLADGEHIDFCLLNPDENDGLTHFLTQHTQAFYQRRLGGWLRNAIPVTEA

Flanking regions ( +/- flanking 50bp)

GTTTTTCTGTGATATTTAAGAAGACAGATGCTGAAATAAGGAGTTCTGTAATGGCGGATATACTCCCGGTGCAGGAAGTGATGATTGAACAGGGCAGCGCACTGCTGCTCAGCGTACCGGAAAACAAACCGGACGCGGTGCTGGATGCGCTGACCGGCGTGTTTAAACAGCACAAACCGGTGCGCCGTGCATTTTGGGTAATGGCAGCCGAAAAAAACAATACTGTCCCGGATGAACCGGTGCTGCTGATTGTGCTGGAACTGAGTGAAGAGCAGGAAGCGGATACCGTGATCCGTCAGGCGGCTGAGGCTGCGATGGAGCACCTCGCTGACGGGGAGCATATTGATTTTTGTCTGTTAAATCCGGATGAAAATGACGGGCTGACGCACTTCCTGACACAGCACACTCAGGCATTCTATCAGCGCCGTCTCGGTGGCTGGCTGCGTAACGCCATTCCGGTAACAGAAGCGTAACAATAATTTATCCGGATGGTGAATATGTGTAGTGCATATATTCAGAATAA