Homologs in group_2457

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_00030 FBDBKF_00030 100.0 Morganella morganii S1 yopX YopX protein domain-containing protein
EHELCC_01515 EHELCC_01515 100.0 Morganella morganii S2 yopX YopX protein domain-containing protein
LHKJJB_00090 LHKJJB_00090 100.0 Morganella morganii S3 yopX YopX protein domain-containing protein
HKOGLL_00130 HKOGLL_00130 100.0 Morganella morganii S5 yopX YopX protein domain-containing protein
F4V73_RS18135 F4V73_RS18135 32.7 Morganella psychrotolerans - hypothetical protein

Distribution of the homologs in the orthogroup group_2457

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2457

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella morganii S4
Locus tag NLDBIP_01945
Feature type CDS
Gene yopX
Product YopX protein domain-containing protein
Location 375304 - 375624 (strand: -1)
Length 321 (nucleotides) / 106 (amino acids)

Contig

Accession ZDB_519
Length 680340 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2457
Orthogroup size 6
N. genomes 6

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Genomic region

Protein Sequence

MAHGIIVYDDRGNKILDSGKRLGRFVGWHDINPAPVGQFKYSWDHRNLLPMGEIFVWVNPSFWFNHNGWCDCRVENGVIIFEGNLRRNDEQRARETYMRILYGVKS

Flanking regions ( +/- flanking 50bp)

TGACAATAACCGGCTGACGGTCATTATTGGTGATATATCGGGGTATTAATATGGCTCACGGGATTATTGTATATGATGATCGCGGTAATAAAATATTAGATTCCGGTAAAAGACTCGGTCGGTTCGTCGGCTGGCATGATATTAATCCTGCACCGGTCGGTCAGTTTAAATACAGCTGGGATCACCGGAACCTGCTCCCTATGGGGGAGATTTTTGTCTGGGTTAATCCGAGCTTTTGGTTCAATCATAACGGCTGGTGCGATTGCCGGGTTGAAAATGGCGTTATTATTTTTGAGGGTAATTTAAGGCGAAACGACGAACAGAGAGCCAGGGAAACTTATATGCGTATATTATATGGTGTAAAATCATGAAACACGGTTTTATATGTTTTGGTGACACCGGCCGGATGCAAATTGACGGC