Homologs in group_3132

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4 homologs were identified in 4 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_00030 FBDBKF_00030 100.0 Morganella morganii S1 yopX YopX protein domain-containing protein
NLDBIP_01945 NLDBIP_01945 100.0 Morganella morganii S4 yopX YopX protein domain-containing protein
LHKJJB_00090 LHKJJB_00090 100.0 Morganella morganii S3 yopX YopX protein domain-containing protein
HKOGLL_00130 HKOGLL_00130 100.0 Morganella morganii S5 yopX YopX protein domain-containing protein

Distribution of the homologs in the orthogroup group_3132

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3132

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella morganii S2
Locus tag EHELCC_01515
Feature type CDS
Gene yopX
Product YopX protein domain-containing protein
Location 304512 - 304832 (strand: 1)
Length 321 (nucleotides) / 106 (amino acids)
In genomic island -

Contig

Accession ZDB_213
Length 680219 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3132
Orthogroup size 5
N. genomes 5

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Genomic region

Protein Sequence

MAHGIIVYDDRGNKILDSGKRLGRFVGWHDINPAPVGQFKYSWDHRNLLPMGEIFVWVNPSFWFNHNGWCDCRVENGVIIFEGNLRRNDEQRARETYMRILYGVKS

Flanking regions ( +/- flanking 50bp)

TGACAATAACCGGCTGACGGTCATTATTGGTGATATATCGGGGTATTAATATGGCTCACGGGATTATTGTATATGATGATCGCGGTAATAAAATATTAGATTCCGGTAAAAGACTCGGTCGGTTCGTCGGCTGGCATGATATTAATCCTGCACCGGTCGGTCAGTTTAAATACAGCTGGGATCACCGGAACCTGCTCCCTATGGGGGAGATTTTTGTCTGGGTTAATCCGAGCTTTTGGTTCAATCATAACGGCTGGTGCGATTGCCGGGTTGAAAATGGCGTTATTATTTTTGAGGGTAATTTAAGGCGAAACGACGAACAGAGAGCCAGGGAAACTTATATGCGTATATTATATGGTGTAAAATCATGAAACACGGTTTTATATGTTTTGGTGACACCGGCCGGATGCAAATTGACGGC