Homologs in group_596

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_01775 FBDBKF_01775 100.0 Morganella morganii S1 yjjB threonine/serine exporter
EHELCC_02245 EHELCC_02245 100.0 Morganella morganii S2 yjjB threonine/serine exporter
LHKJJB_00820 LHKJJB_00820 100.0 Morganella morganii S3 yjjB threonine/serine exporter
HKOGLL_00860 HKOGLL_00860 100.0 Morganella morganii S5 yjjB threonine/serine exporter
F4V73_RS04105 F4V73_RS04105 90.4 Morganella psychrotolerans - threonine/serine exporter
PMI_RS06980 PMI_RS06980 71.3 Proteus mirabilis HI4320 - threonine/serine exporter

Distribution of the homologs in the orthogroup group_596

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_596

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
B4EX78 1.15e-79 235 71 0 157 3 yjjB Probable succinate transporter subunit YjjB Proteus mirabilis (strain HI4320)
A6THX5 2.79e-78 232 70 0 157 3 yjjB Probable succinate transporter subunit YjjB Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578)
B5Y298 3.29e-78 232 70 0 157 3 yjjB Probable succinate transporter subunit YjjB Klebsiella pneumoniae (strain 342)
A0A0H3FQN0 1.16e-77 230 70 0 157 1 yjjB Probable succinate transporter subunit YjjB Klebsiella aerogenes (strain ATCC 13048 / DSM 30053 / CCUG 1429 / JCM 1235 / KCTC 2190 / NBRC 13534 / NCIMB 10102 / NCTC 10006 / CDC 819-56)
B6I2P6 9.74e-77 228 70 0 157 3 yjjB Probable succinate transporter subunit YjjB Escherichia coli (strain SE11)
Q1R2E2 1.7e-76 227 70 0 157 3 yjjB Probable succinate transporter subunit YjjB Escherichia coli (strain UTI89 / UPEC)
P0ADD3 1.7e-76 227 70 0 157 3 yjjB Probable succinate transporter subunit YjjB Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q0T8U9 1.7e-76 227 70 0 157 3 yjjB Probable succinate transporter subunit YjjB Escherichia coli O6:K15:H31 (strain 536 / UPEC)
A1AJN6 1.7e-76 227 70 0 157 3 yjjB Probable succinate transporter subunit YjjB Escherichia coli O1:K1 / APEC
Q3YU30 2.76e-76 227 70 0 157 3 yjjB Probable succinate transporter subunit YjjB Shigella sonnei (strain Ss046)
B1IS55 2.76e-76 227 70 0 157 3 yjjB Probable succinate transporter subunit YjjB Escherichia coli (strain ATCC 8739 / DSM 1576 / NBRC 3972 / NCIMB 8545 / WDCM 00012 / Crooks)
P0ADD2 3.08e-76 227 70 0 157 1 yjjB Probable succinate transporter subunit YjjB Escherichia coli (strain K12)
C4ZT46 3.08e-76 227 70 0 157 3 yjjB Probable succinate transporter subunit YjjB Escherichia coli (strain K12 / MC4100 / BW2952)
P0ADD4 3.08e-76 227 70 0 157 3 yjjB Probable succinate transporter subunit YjjB Escherichia coli O157:H7
B7UQZ2 3.08e-76 227 70 0 157 3 yjjB Probable succinate transporter subunit YjjB Escherichia coli O127:H6 (strain E2348/69 / EPEC)
Q7UAJ5 3.67e-76 226 70 0 157 3 yjjB Probable succinate transporter subunit YjjB Shigella flexneri
Q0SX48 3.67e-76 226 70 0 157 3 yjjB Probable succinate transporter subunit YjjB Shigella flexneri serotype 5b (strain 8401)
A4W678 6.07e-76 226 69 0 157 3 yjjB Probable succinate transporter subunit YjjB Enterobacter sp. (strain 638)
Q31SX3 8.62e-76 226 70 0 157 3 yjjB Probable succinate transporter subunit YjjB Shigella boydii serotype 4 (strain Sb227)
B5Z4P6 4.81e-75 224 69 0 157 3 yjjB Probable succinate transporter subunit YjjB Escherichia coli O157:H7 (strain EC4115 / EHEC)
A8AM03 6.06e-75 223 69 0 157 3 yjjB Probable succinate transporter subunit YjjB Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696)
Q8ZJX4 6.54e-75 223 68 0 157 3 yjjB Probable succinate transporter subunit YjjB Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
B4TU22 6.54e-75 223 68 0 157 3 yjjB Probable succinate transporter subunit YjjB Salmonella schwarzengrund (strain CVM19633)
B5BKZ9 6.54e-75 223 68 0 157 3 yjjB Probable succinate transporter subunit YjjB Salmonella paratyphi A (strain AKU_12601)
A9N7B4 6.54e-75 223 68 0 157 3 yjjB Probable succinate transporter subunit YjjB Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7)
Q5PM72 6.54e-75 223 68 0 157 3 yjjB Probable succinate transporter subunit YjjB Salmonella paratyphi A (strain ATCC 9150 / SARB42)
B4T4F0 6.54e-75 223 68 0 157 3 yjjB Probable succinate transporter subunit YjjB Salmonella newport (strain SL254)
B4TGY0 6.54e-75 223 68 0 157 3 yjjB Probable succinate transporter subunit YjjB Salmonella heidelberg (strain SL476)
B5R9T1 6.54e-75 223 68 0 157 3 yjjB Probable succinate transporter subunit YjjB Salmonella gallinarum (strain 287/91 / NCTC 13346)
B5R2H8 6.54e-75 223 68 0 157 3 yjjB Probable succinate transporter subunit YjjB Salmonella enteritidis PT4 (strain P125109)
B5FTA5 6.54e-75 223 68 0 157 3 yjjB Probable succinate transporter subunit YjjB Salmonella dublin (strain CT_02021853)
Q57G59 6.54e-75 223 68 0 157 3 yjjB Probable succinate transporter subunit YjjB Salmonella choleraesuis (strain SC-B67)
B5F504 6.54e-75 223 68 0 157 3 yjjB Probable succinate transporter subunit YjjB Salmonella agona (strain SL483)
Q327N3 1.56e-74 223 68 0 157 3 yjjB Probable succinate transporter subunit YjjB Shigella dysenteriae serotype 1 (strain Sd197)
A9MRX4 2.36e-74 222 67 0 157 3 yjjB Probable succinate transporter subunit YjjB Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
Q8Z0W0 9.38e-74 220 67 0 157 3 yjjB Probable succinate transporter subunit YjjB Salmonella typhi
A1JJF0 5.18e-73 218 67 0 155 3 yjjB Probable succinate transporter subunit YjjB Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081)
Q66ER4 2.74e-72 217 67 0 154 3 yjjB Probable succinate transporter subunit YjjB Yersinia pseudotuberculosis serotype I (strain IP32953)
Q1CMU0 1.68e-68 207 66 1 154 3 yjjB Probable succinate transporter subunit YjjB Yersinia pestis bv. Antiqua (strain Nepal516)
Q74Q23 1.68e-68 207 66 1 154 3 yjjB Probable succinate transporter subunit YjjB Yersinia pestis
Q1C0I3 1.68e-68 207 66 1 154 3 yjjB Probable succinate transporter subunit YjjB Yersinia pestis bv. Antiqua (strain Antiqua)
Q6D0D4 9.67e-62 190 64 0 154 3 yjjB Probable succinate transporter subunit YjjB Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672)
C6DEZ3 3.88e-61 188 64 0 154 3 yjjB Probable succinate transporter subunit YjjB Pectobacterium carotovorum subsp. carotovorum (strain PC1)
P44520 2.8e-52 171 50 0 152 3 HI_0108 Uncharacterized protein HI_0108 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)

  • Number of RefSeq hits:

General

Source Morganella morganii S4
Locus tag NLDBIP_01215
Feature type CDS
Gene yjjB
Product threonine/serine exporter
Location 247699 - 248175 (strand: -1)
Length 477 (nucleotides) / 158 (amino acids)

Contig

Accession ZDB_519
Length 680340 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_596
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF12821 Threonine/Serine exporter, ThrE

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3610 Function unknown (S) S Uncharacterized membrane protein YjjB, DUF3815 family

Protein Sequence

MMTVLSFLAALAQDMLLAAIPAAGFAMVFNVPKRALKYCALLGAIGHGSRFMLIAAGFDIVAATFWASVLVGIIGIQWSRWWLAHPKVFTVAAIIPMFPGINAYMAMLAVIKLSQSGFTPELLEMLVSNFLRAGFVVGALSIGLSVPGLWLYRKRPRV

Flanking regions ( +/- flanking 50bp)

TGTATCGGTATTTTTACCGCGATCACACTCGGCAGCCTGAGGGACTGGATATGATGACGGTACTCTCTTTTCTGGCCGCACTGGCGCAGGACATGCTGCTGGCGGCTATTCCGGCGGCAGGGTTTGCCATGGTATTCAACGTGCCGAAACGGGCACTGAAATACTGCGCACTGTTGGGGGCAATAGGTCACGGCAGCCGGTTTATGCTGATTGCCGCCGGTTTTGACATCGTTGCCGCCACATTCTGGGCATCGGTGCTGGTGGGGATCATCGGTATTCAGTGGTCCCGCTGGTGGCTGGCACACCCGAAAGTCTTTACCGTAGCGGCCATAATCCCGATGTTTCCGGGTATTAATGCCTATATGGCAATGCTGGCGGTGATCAAACTGTCACAGTCCGGTTTTACCCCGGAACTGCTGGAGATGCTGGTGAGCAATTTCCTGCGGGCGGGCTTTGTGGTCGGCGCGTTGTCTATCGGGCTGTCTGTTCCTGGTTTGTGGTTGTACCGCAAGCGTCCGCGCGTTTAGCTGATGCGGGTCAGATTCAGGATAATGTCCATGACCGGTTTATCGGTCAC