COG3610


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG3610, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 7 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description Uncharacterized membrane protein YjjB, DUF3815 family
Function(s) descr. Function unknown (S)

Occurence in the database

COG3610 is associated with 7 different proteins (see tab "Protein list" and "Profile")
The 7 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_596 FBDBKF_01775 44141 44617 1 yjjB threonine/serine exporter Morganella morganii S1
1 group_596 EHELCC_02245 431961 432437 1 yjjB threonine/serine exporter Morganella morganii S2
2 group_596 NLDBIP_01215 247699 248175 -1 yjjB threonine/serine exporter Morganella morganii S4
3 group_596 LHKJJB_00820 144510 144986 1 yjjB threonine/serine exporter Morganella morganii S3
4 group_596 HKOGLL_00860 150021 150497 1 yjjB threonine/serine exporter Morganella morganii S5
5 group_596 F4V73_RS04105 868145 868618 1 threonine/serine exporter Morganella psychrotolerans
6 group_596 PMI_RS06980 1526199 1526672 -1 threonine/serine exporter Proteus mirabilis HI4320