Homologs in group_3025

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_17980 FBDBKF_17980 100.0 Morganella morganii S1 - Fimbria/pilus periplasmic chaperone
EHELCC_06355 EHELCC_06355 100.0 Morganella morganii S2 - Fimbria/pilus periplasmic chaperone
NLDBIP_06675 NLDBIP_06675 100.0 Morganella morganii S4 - Fimbria/pilus periplasmic chaperone
HKOGLL_04715 HKOGLL_04715 100.0 Morganella morganii S5 - Fimbria/pilus periplasmic chaperone
PMI_RS12925 PMI_RS12925 100.0 Proteus mirabilis HI4320 - fimbria/pilus periplasmic chaperone

Distribution of the homologs in the orthogroup group_3025

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3025

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P45991 2.2e-26 102 39 6 150 3 hifB Chaperone protein HifB Haemophilus influenzae
P35757 2.7e-26 102 39 5 147 3 hifB Chaperone protein HifB Haemophilus influenzae
P33128 2.68e-22 92 36 4 147 1 yadV Probable fimbrial chaperone YadV Escherichia coli (strain K12)
P33409 3.21e-16 75 33 4 141 3 fimB Chaperone protein FimB/FhaD Bordetella pertussis (strain Tohama I / ATCC BAA-589 / NCTC 13251)
P42914 2.35e-15 73 31 4 148 2 yraI Probable fimbrial chaperone YraI Escherichia coli (strain K12)
P53520 1.92e-14 71 34 7 146 3 pmfD Chaperone protein PmfD Proteus mirabilis (strain HI4320)
P25402 4.47e-14 70 32 6 143 3 fanE Chaperone protein FanE Escherichia coli
P77249 9.67e-14 68 33 6 143 2 sfmC Probable fimbrial chaperone SfmC Escherichia coli (strain K12)
P37923 1.07e-13 68 33 7 153 3 fimC Chaperone protein FimC Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P62609 1.15e-13 68 31 4 141 1 focC Chaperone protein FocC Escherichia coli
P62610 1.15e-13 68 31 4 141 3 focC Chaperone protein FocC Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q8X5K6 1.72e-12 65 28 4 138 2 lpfB Probable fimbrial chaperone LpfB Escherichia coli O157:H7
P43661 3.05e-11 62 27 4 141 3 lpfB Chaperone protein LpfB Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P33407 3.35e-10 60 28 6 151 3 myfB Chaperone protein MyfB Yersinia enterocolitica
P31697 3.8e-10 59 30 6 144 1 fimC Chaperone protein FimC Escherichia coli (strain K12)
P59590 4.29e-10 59 30 6 144 3 fimC Chaperone protein FimC Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P46004 5.98e-10 58 30 6 150 3 aggD Chaperone protein AggD Escherichia coli
P26926 8e-09 55 26 6 153 1 caf1M Chaperone protein caf1M Yersinia pestis
P75749 9.68e-09 55 28 5 150 3 ybgP Uncharacterized fimbrial chaperone YbgP Escherichia coli (strain K12)
P40876 3.16e-08 54 28 6 147 2 ycbF Uncharacterized fimbrial chaperone YcbF Escherichia coli (strain K12)
P21646 3.51e-08 53 30 6 141 3 mrkB Chaperone protein MrkB Klebsiella pneumoniae
P53519 6.47e-08 53 25 4 147 3 cssC Chaperone protein CssC Escherichia coli
Q8X5E4 1.71e-07 52 26 5 147 2 elfD Probable fimbrial chaperone protein ElfD Escherichia coli O157:H7
P53518 1.87e-07 52 25 4 147 3 cssC Chaperone protein CssC Escherichia coli
P69966 3.49e-07 51 27 6 156 3 psaB Chaperone protein PsaB Yersinia pseudotuberculosis serotype I (strain IP32953)
P69965 3.49e-07 51 27 6 156 3 psaB Chaperone protein PsaB Yersinia pestis
P75856 5.03e-07 50 25 5 147 2 elfD Probable fimbrial chaperone protein ElfD Escherichia coli (strain K12)
P15319 1.52e-06 49 25 4 139 1 papD Chaperone protein PapD Escherichia coli
P77599 5.39e-06 48 28 10 141 2 yfcS Probable fimbrial chaperone YfcS Escherichia coli (strain K12)
P33342 8.69e-06 47 27 7 144 2 yehC Probable fimbrial chaperone YehC Escherichia coli (strain K12)
Q05433 4.05e-05 45 25 7 143 3 clpE Chaperone protein ClpE Escherichia coli
P25401 7.47e-05 44 25 7 143 1 faeE Chaperone protein FaeE Escherichia coli

  • Number of RefSeq hits:

General

Source Morganella morganii S3
Locus tag LHKJJB_19275
Feature type CDS
Gene -
Product Fimbria/pilus periplasmic chaperone
Location 805 - 1266 (strand: 1)
Length 462 (nucleotides) / 153 (amino acids)

Contig

Accession ZDB_390
Length 13558 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3025
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain
PF02753 Pili assembly chaperone PapD, C-terminal domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3121 Extracellular structures (W) W P pilus assembly protein, chaperone PapD

Protein Sequence

MYTGEALPNDRESIFWLNILDISAKPKFENKNNLNVNSNYLQLPIHSRIKLFYRPEKLTRSLSEAYNSVIWHIEKQGAKAFLCADNQSPYFITYNHITLIQSNYSQSINPVDMVAPYSSIRLPIHGNMSGYGKVKWTVVNDYGGHELSESALK

Flanking regions ( +/- flanking 50bp)

CTCCGCTTATATTTCGTATAGAACCTCACACAGGGCAAACATTACGAATTATGTATACGGGTGAAGCACTGCCTAATGATCGTGAATCAATTTTTTGGCTAAATATACTGGATATTTCAGCTAAACCTAAATTTGAAAATAAAAATAATTTAAATGTAAACTCAAATTATCTTCAACTCCCGATCCATAGTCGCATAAAGCTATTCTATCGTCCAGAAAAACTCACACGTTCTCTCAGTGAGGCCTATAATTCTGTTATATGGCATATTGAAAAACAAGGAGCAAAGGCCTTTCTTTGTGCAGATAATCAAAGTCCTTATTTTATTACTTATAATCATATTACTTTGATTCAGAGCAACTACTCACAATCAATTAATCCAGTAGATATGGTTGCTCCTTATTCTTCAATACGCCTTCCTATACATGGAAATATGTCGGGATATGGAAAAGTGAAGTGGACAGTTGTTAACGATTATGGTGGGCATGAATTAAGTGAGTCAGCTCTGAAATAAGGATAATATTTATGAAATATTGCACTTAAACTGAACATCATTCATTCCTG