Homologs in group_3676

Help

3 homologs were identified in 3 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
EHELCC_17705 EHELCC_17705 100.0 Morganella morganii S2 - hypothetical protein
NLDBIP_19375 NLDBIP_19375 100.0 Morganella morganii S4 - hypothetical protein
HKOGLL_18935 HKOGLL_18935 100.0 Morganella morganii S5 - hypothetical protein

Distribution of the homologs in the orthogroup group_3676

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_3676

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella morganii S3
Locus tag LHKJJB_18145
Feature type CDS
Gene -
Product hypothetical protein
Location 41533 - 42051 (strand: -1)
Length 519 (nucleotides) / 172 (amino acids)
In genomic island -

Contig

Accession ZDB_381
Length 42053 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3676
Orthogroup size 4
N. genomes 4

Actions

Genomic region

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG4974 Replication, recombination and repair (L) L Site-specific recombinase XerD

Protein Sequence

MFCALSTTSSRIAKSNFSSSASIFSFTAFTVGFFEITPQNSGGIYIKQGKTGVAQIKAWTERLHAAINLSNTLPLDSGISSIYVLHQSRGSGYTRDGFNSRWRKAKEAAAKKFPHLNFNFTFHDLKAKGISDLDGPLSEKQKISGHKNITQTARYDRKVMVVPVVGGQKKTV

Flanking regions ( +/- flanking 50bp)

CATGTTCTGCGCGTTGAGCACCACATCATCCAGAATTGCAAAATCGAATTTCTCTTCTTCGGCTTCGATTTTCTCTTTCACCGCTTTCACAGTCGGGTTTTTCGAGATCACGCCGCAGAATTCCGGTGGTATTTACATTAAGCAAGGAAAAACAGGTGTAGCACAAATAAAGGCATGGACGGAGCGCCTGCATGCAGCTATAAACCTGAGTAATACTCTCCCCCTTGATTCTGGTATCAGCAGTATTTATGTACTTCATCAATCCAGAGGATCCGGGTATACACGGGATGGTTTCAACAGTCGCTGGAGAAAAGCCAAAGAAGCTGCAGCTAAAAAATTCCCGCACCTGAATTTTAACTTCACCTTTCATGATTTGAAGGCTAAAGGTATTTCAGATCTCGATGGACCACTGTCAGAAAAACAGAAAATATCTGGGCATAAAAATATCACTCAAACCGCCCGATATGACAGAAAAGTGATGGTTGTTCCTGTTGTCGGTGGTCAGAAAAAGACAGTTTGAAGGAGAGAATATAGTGAAATTATATAGTGAAAATATAGTGAAGTGTGATT