Help to interpret the results
The page contains two contents:
General: this table lists the KO entries and their description specific to this pathway, and provides their frequencies in Morganella morganii S3 and in the whole dataset.
Profile + homologs: the distribution of the Kegg entries of DNA replication Kegg pathway is displayed here. Given a Kegg entry and a genome, a red box indicates that one or more loci have been annotated with, while a green box indicates that no locus/loci has(have) been annotated with it, but it/they is/are part of an Orthologous group in which other members have been annotated with that Kegg entry, so it is likely that this copy(ies) also performs this Kegg function.
Check the composition of the DNA replication pathway
| KO | Description | #in this genome | All occurrences |
|---|---|---|---|
| K01972 | DNA ligase (NAD+) [EC:6.5.1.2] | 1 | 8 |
| K02209 | DNA replication licensing factor MCM5 [EC:5.6.2.3] | 0 | 0 |
| K02210 | DNA replication licensing factor MCM7 [EC:5.6.2.3] | 0 | 0 |
| K02212 | DNA replication licensing factor MCM4 [EC:5.6.2.3] | 0 | 0 |
| K02314 | replicative DNA helicase [EC:5.6.2.3] | 3 | 20 |
| K02316 | DNA primase [EC:2.7.7.101] | 1 | 7 |
| K02319 | DNA polymerase, archaea type [EC:2.7.7.7] | 0 | 0 |
| K02320 | DNA polymerase alpha subunit A [EC:2.7.7.7] | 0 | 0 |
| K02321 | DNA polymerase alpha subunit B | 0 | 0 |
| K02322 | DNA polymerase II large subunit [EC:2.7.7.7] | 0 | 0 |
| K02323 | DNA polymerase II small subunit [EC:2.7.7.7] | 0 | 0 |
| K02324 | DNA polymerase epsilon subunit 1 [EC:2.7.7.7] | 0 | 0 |
| K02325 | DNA polymerase epsilon subunit 2 [EC:2.7.7.7] | 0 | 0 |
| K02326 | DNA polymerase epsilon subunit 3 [EC:2.7.7.7] | 0 | 0 |
| K02327 | DNA polymerase delta subunit 1 [EC:2.7.7.7] | 0 | 0 |
| K02328 | DNA polymerase delta subunit 2 | 0 | 0 |
| K02335 | DNA polymerase I [EC:2.7.7.7] | 1 | 7 |
| K02337 | DNA polymerase III subunit alpha [EC:2.7.7.7] | 1 | 7 |
| K02338 | DNA polymerase III subunit beta [EC:2.7.7.7] | 1 | 7 |
| K02339 | DNA polymerase III subunit chi [EC:2.7.7.7] | 1 | 7 |
| K02340 | DNA polymerase III subunit delta [EC:2.7.7.7] | 1 | 7 |
| K02341 | DNA polymerase III subunit delta' [EC:2.7.7.7] | 1 | 7 |
| K02342 | DNA polymerase III subunit epsilon [EC:2.7.7.7] | 1 | 8 |
| K02343 | DNA polymerase III subunit gamma/tau [EC:2.7.7.7] | 1 | 7 |
| K02344 | DNA polymerase III subunit psi [EC:2.7.7.7] | 1 | 7 |
| K02345 | DNA polymerase III subunit theta [EC:2.7.7.7] | 2 | 13 |
| K02540 | DNA replication licensing factor MCM2 [EC:5.6.2.3] | 0 | 0 |
| K02541 | DNA replication licensing factor MCM3 [EC:5.6.2.3] | 0 | 0 |
| K02542 | DNA replication licensing factor MCM6 [EC:5.6.2.3] | 0 | 0 |
| K02683 | DNA primase small subunit [EC:2.7.7.102] | 0 | 0 |
| K02684 | DNA primase small subunit [EC:2.7.7.102] | 0 | 0 |
| K02685 | DNA primase large subunit | 0 | 0 |
| K03111 | single-strand DNA-binding protein | 4 | 25 |
| K03469 | ribonuclease HI [EC:3.1.26.4] | 1 | 7 |
| K03470 | ribonuclease HII [EC:3.1.26.4] | 1 | 7 |
| K03471 | ribonuclease HIII [EC:3.1.26.4] | 0 | 0 |
| K03504 | DNA polymerase delta subunit 3 | 0 | 0 |
| K03505 | DNA polymerase delta subunit 4 | 0 | 0 |
| K03506 | DNA polymerase epsilon subunit 4 [EC:2.7.7.7] | 0 | 0 |
| K03763 | DNA polymerase III subunit alpha, Gram-positive type [EC:2.7.7.7] | 0 | 0 |
| K04799 | flap endonuclease-1 [EC:3.1.-.-] | 0 | 0 |
| K04800 | replication factor C large subunit | 0 | 0 |
| K04801 | replication factor C small subunit | 0 | 0 |
| K04802 | proliferating cell nuclear antigen | 0 | 0 |
| K07466 | replication factor A1 | 0 | 0 |
| K10726 | replicative DNA helicase Mcm [EC:5.6.2.3] | 0 | 0 |
| K10739 | replication factor A2 | 0 | 0 |
| K10740 | replication factor A3 | 0 | 0 |
| K10741 | replication factor A4 | 0 | 0 |
| K10742 | DNA replication ATP-dependent helicase/nuclease Dna2 [EC:5.6.2.3 3.1.-.-] | 0 | 0 |
| K10743 | ribonuclease H2 subunit A [EC:3.1.26.4] | 0 | 0 |
| K10744 | ribonuclease H2 subunit B | 0 | 0 |
| K10745 | ribonuclease H2 subunit C | 0 | 0 |
| K10747 | DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] | 0 | 0 |
| K10754 | replication factor C subunit 1 | 0 | 0 |
| K10755 | replication factor C subunit 2/4 | 0 | 0 |
| K10756 | replication factor C subunit 3/5 | 0 | 0 |
| K14159 | ribonuclease HI / DNA polymerase III subunit epsilon [EC:3.1.26.4 2.7.7.7] | 0 | 0 |
| K18882 | DNA primase large subunit | 0 | 0 |
| K22316 | ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:3.1.26.4 3.1.3.73] | 0 | 0 |