Homologs in group_2219

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_16955 FBDBKF_16955 100.0 Morganella morganii S1 oca4 Protein tyrosine/serine phosphatase Oca4
EHELCC_16635 EHELCC_16635 100.0 Morganella morganii S2 oca4 Protein tyrosine/serine phosphatase Oca4
NLDBIP_16845 NLDBIP_16845 100.0 Morganella morganii S4 oca4 Protein tyrosine/serine phosphatase Oca4
HKOGLL_17590 HKOGLL_17590 100.0 Morganella morganii S5 oca4 Protein tyrosine/serine phosphatase Oca4
F4V73_RS18425 F4V73_RS18425 93.1 Morganella psychrotolerans - tyrosine-protein phosphatase
PMI_RS17560 PMI_RS17560 69.2 Proteus mirabilis HI4320 - tyrosine-protein phosphatase

Distribution of the homologs in the orthogroup group_2219

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2219

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
I6WXK4 4.17e-20 90 29 10 288 1 ptpB Triple specificity protein phosphatase PtpB Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P40289 1.14e-13 72 28 5 249 3 H16_A0669 Putative tyrosine-protein phosphatase H16_A0669 Cupriavidus necator (strain ATCC 17699 / DSM 428 / KCTC 22496 / NCIMB 10442 / H16 / Stanier 337)
Q05918 0.000256 45 23 8 240 1 iphP Tyrosine-protein phosphatase Nostoc commune

  • Number of RefSeq hits:

General

Source Morganella morganii S3
Locus tag LHKJJB_16625
Feature type CDS
Gene oca4
Product Protein tyrosine/serine phosphatase Oca4
Location 18585 - 19367 (strand: -1)
Length 783 (nucleotides) / 260 (amino acids)

Contig

Accession ZDB_376
Length 68509 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2219
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF13350 Tyrosine phosphatase family

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2365 Signal transduction mechanisms (T) T Protein tyrosine/serine phosphatase Oca4

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K01104 protein-tyrosine phosphatase [EC:3.1.3.48] - -

Protein Sequence

MTRQPLPHPSVLPLDGGINFRDLGNKVLPDGSKIKPGLLFRAGALDRLSDNDLTRLTEQNLFQILDYRDSGEIADKPDRLWNGALYTNAPANPMSKEVDANLEKLGNEALTGFDPKAFMLRLYELLPLGNPAYHALGDMLRNPEKGGIVQHCAVGKDRTGVGSALVLFALGADTDMVMEDYLLTNDTLAPYRHELLAEHAKTMPEAVVEKFAYVYSVQPDFLNTALKSIHSHYGSIDTWLAKDIGLTTAVRDKIRNHFLE

Flanking regions ( +/- flanking 50bp)

GATACAGTGATCGTGCCGAACATACTGATAATAATGATAAAGAGGTATCAATGACCAGACAGCCATTACCGCATCCTTCTGTATTGCCGCTCGACGGCGGGATCAATTTTCGTGACCTGGGAAACAAAGTGCTGCCGGACGGCAGTAAAATCAAACCCGGCCTGCTGTTCCGTGCCGGGGCGCTGGATCGCCTGAGCGACAACGACTTAACCCGCCTGACAGAGCAGAATCTGTTTCAGATCCTGGATTACCGCGACAGCGGCGAAATTGCTGATAAACCGGATCGTCTCTGGAATGGCGCGCTGTACACGAACGCACCGGCAAATCCGATGTCAAAGGAAGTGGATGCTAACCTTGAGAAACTCGGCAATGAAGCGCTGACGGGGTTTGATCCGAAAGCTTTTATGCTGCGCCTCTATGAACTGCTGCCGCTGGGCAACCCTGCGTATCATGCACTCGGCGATATGCTGCGCAACCCGGAAAAAGGCGGCATTGTGCAGCACTGTGCGGTCGGTAAAGACCGGACCGGTGTGGGTTCGGCACTGGTGCTGTTTGCACTCGGCGCGGATACCGATATGGTGATGGAAGATTACCTGCTGACCAATGACACGCTGGCACCTTACCGCCATGAACTGCTGGCGGAACACGCGAAAACCATGCCGGAAGCAGTGGTGGAGAAATTCGCCTATGTTTACTCCGTACAGCCTGATTTCCTGAATACCGCACTGAAAAGTATTCACTCTCATTATGGCAGTATTGATACCTGGCTGGCGAAAGATATCGGGCTGACAACAGCAGTCCGCGACAAAATCCGCAACCATTTCCTTGAGTAATATCAGACAATAAGGGGGATTTTCTGGCACCGGCAGATATTATCACCACC