Homologs in group_1584

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_10335 FBDBKF_10335 100.0 Morganella morganii S1 uspB universal stress protein UspB
EHELCC_14670 EHELCC_14670 100.0 Morganella morganii S2 uspB universal stress protein UspB
NLDBIP_14500 NLDBIP_14500 100.0 Morganella morganii S4 uspB universal stress protein UspB
HKOGLL_13465 HKOGLL_13465 100.0 Morganella morganii S5 uspB universal stress protein UspB
F4V73_RS14035 F4V73_RS14035 91.0 Morganella psychrotolerans uspB universal stress protein UspB
PMI_RS14885 PMI_RS14885 65.5 Proteus mirabilis HI4320 uspB universal stress protein UspB

Distribution of the homologs in the orthogroup group_1584

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1584

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P59988 9.52e-48 151 60 0 110 3 uspB Universal stress protein B Photorhabdus laumondii subsp. laumondii (strain DSM 15139 / CIP 105565 / TT01)
A1JSP6 3.49e-42 137 58 0 110 3 uspB Universal stress protein B Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081)
B1JHV1 5.52e-42 136 56 0 110 3 uspB Universal stress protein B Yersinia pseudotuberculosis serotype O:3 (strain YPIII)
Q664F8 5.52e-42 136 56 0 110 3 uspB Universal stress protein B Yersinia pseudotuberculosis serotype I (strain IP32953)
A4TQX7 5.52e-42 136 56 0 110 3 uspB Universal stress protein B Yersinia pestis (strain Pestoides F)
Q1CDI5 5.52e-42 136 56 0 110 3 uspB Universal stress protein B Yersinia pestis bv. Antiqua (strain Nepal516)
Q8ZA50 5.52e-42 136 56 0 110 3 uspB Universal stress protein B Yersinia pestis
B2K6K2 5.52e-42 136 56 0 110 3 uspB Universal stress protein B Yersinia pseudotuberculosis serotype IB (strain PB1/+)
Q1C1B3 5.52e-42 136 56 0 110 3 uspB Universal stress protein B Yersinia pestis bv. Antiqua (strain Antiqua)
A7FP02 5.52e-42 136 56 0 110 3 uspB Universal stress protein B Yersinia pseudotuberculosis serotype O:1b (strain IP 31758)
Q6DB52 6.51e-42 136 55 0 110 3 uspB Universal stress protein B Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672)
C5BB13 6.35e-41 134 55 0 110 3 uspB Universal stress protein B Edwardsiella ictaluri (strain 93-146)
Q3YW37 2.12e-40 132 55 0 110 3 uspB Universal stress protein B Shigella sonnei (strain Ss046)
P0A8S8 2.12e-40 132 55 0 110 3 uspB Universal stress protein B Shigella flexneri
Q0SZH0 2.12e-40 132 55 0 110 3 uspB Universal stress protein B Shigella flexneri serotype 5b (strain 8401)
Q32AW3 2.12e-40 132 55 0 110 3 uspB Universal stress protein B Shigella dysenteriae serotype 1 (strain Sd197)
Q31VD1 2.12e-40 132 55 0 110 3 uspB Universal stress protein B Shigella boydii serotype 4 (strain Sb227)
B2U3Q2 2.12e-40 132 55 0 110 3 uspB Universal stress protein B Shigella boydii serotype 18 (strain CDC 3083-94 / BS512)
Q1R5C2 2.12e-40 132 55 0 110 3 uspB Universal stress protein B Escherichia coli (strain UTI89 / UPEC)
B6I356 2.12e-40 132 55 0 110 3 uspB Universal stress protein B Escherichia coli (strain SE11)
B7NEC5 2.12e-40 132 55 0 110 3 uspB Universal stress protein B Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC)
P0A8S5 2.12e-40 132 55 0 110 1 uspB Universal stress protein B Escherichia coli (strain K12)
B1J0D8 2.12e-40 132 55 0 110 3 uspB Universal stress protein B Escherichia coli (strain ATCC 8739 / DSM 1576 / NBRC 3972 / NCIMB 8545 / WDCM 00012 / Crooks)
P0A8S6 2.12e-40 132 55 0 110 3 uspB Universal stress protein B Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q0TBW9 2.12e-40 132 55 0 110 3 uspB Universal stress protein B Escherichia coli O6:K15:H31 (strain 536 / UPEC)
A1AH31 2.12e-40 132 55 0 110 3 uspB Universal stress protein B Escherichia coli O1:K1 / APEC
A8A5V1 2.12e-40 132 55 0 110 3 uspB Universal stress protein B Escherichia coli O9:H4 (strain HS)
B1X7U9 2.12e-40 132 55 0 110 3 uspB Universal stress protein B Escherichia coli (strain K12 / DH10B)
C4ZW41 2.12e-40 132 55 0 110 3 uspB Universal stress protein B Escherichia coli (strain K12 / MC4100 / BW2952)
B7M2Q4 2.12e-40 132 55 0 110 3 uspB Universal stress protein B Escherichia coli O8 (strain IAI1)
B7N1S8 2.12e-40 132 55 0 110 3 uspB Universal stress protein B Escherichia coli O81 (strain ED1a)
B7NNB6 2.12e-40 132 55 0 110 3 uspB Universal stress protein B Escherichia coli O7:K1 (strain IAI39 / ExPEC)
P0A8S7 2.12e-40 132 55 0 110 3 uspB Universal stress protein B Escherichia coli O157:H7
B7L5X4 2.12e-40 132 55 0 110 3 uspB Universal stress protein B Escherichia coli (strain 55989 / EAEC)
B7MEI9 2.12e-40 132 55 0 110 3 uspB Universal stress protein B Escherichia coli O45:K1 (strain S88 / ExPEC)
B7UL42 2.12e-40 132 55 0 110 3 uspB Universal stress protein B Escherichia coli O127:H6 (strain E2348/69 / EPEC)
A7ZT30 2.12e-40 132 55 0 110 3 uspB Universal stress protein B Escherichia coli O139:H28 (strain E24377A / ETEC)
A9MM62 2.44e-40 132 55 0 110 3 uspB Universal stress protein B Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
A6TFB2 2.73e-40 132 55 0 110 3 uspB Universal stress protein B Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578)
B5XN50 2.73e-40 132 55 0 110 3 uspB Universal stress protein B Klebsiella pneumoniae (strain 342)
P67686 2.88e-40 132 55 0 110 3 uspB Universal stress protein B Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P67687 2.88e-40 132 55 0 110 3 uspB Universal stress protein B Salmonella typhi
B5BHN6 2.88e-40 132 55 0 110 3 uspB Universal stress protein B Salmonella paratyphi A (strain AKU_12601)
C0Q145 2.88e-40 132 55 0 110 3 uspB Universal stress protein B Salmonella paratyphi C (strain RKS4594)
Q5PJP1 2.88e-40 132 55 0 110 3 uspB Universal stress protein B Salmonella paratyphi A (strain ATCC 9150 / SARB42)
B5RGT6 2.88e-40 132 55 0 110 3 uspB Universal stress protein B Salmonella gallinarum (strain 287/91 / NCTC 13346)
B5R3Z1 2.88e-40 132 55 0 110 3 uspB Universal stress protein B Salmonella enteritidis PT4 (strain P125109)
Q57IN7 2.88e-40 132 55 0 110 3 uspB Universal stress protein B Salmonella choleraesuis (strain SC-B67)
B7LSX5 1.06e-39 130 55 0 110 3 uspB Universal stress protein B Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CCUG 18766 / IAM 14443 / JCM 21226 / LMG 7866 / NBRC 102419 / NCTC 12128 / CDC 0568-73)
B2VHE5 4.21e-39 129 56 0 110 3 uspB Universal stress protein B Erwinia tasmaniensis (strain DSM 17950 / CFBP 7177 / CIP 109463 / NCPPB 4357 / Et1/99)
A7MKM3 6.67e-39 129 57 0 110 3 uspB Universal stress protein B Cronobacter sakazakii (strain ATCC BAA-894)
A8AR73 1.6e-38 128 53 0 110 3 uspB Universal stress protein B Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696)
A4WFT3 2.04e-38 127 53 0 110 3 uspB Universal stress protein B Enterobacter sp. (strain 638)
C6DJB7 1.26e-36 123 57 0 110 3 uspB Universal stress protein B Pectobacterium carotovorum subsp. carotovorum (strain PC1)
Q87TJ1 5.37e-23 88 37 0 107 3 uspB Universal stress protein B homolog Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
A7MTY8 2.03e-22 87 38 0 101 3 uspB Universal stress protein B homolog Vibrio campbellii (strain ATCC BAA-1116)
B7VHB5 1.05e-20 82 36 0 103 3 uspB Universal stress protein B homolog Vibrio atlanticus (strain LGP32)
C3LPS1 2.21e-19 79 37 0 96 3 uspB Universal stress protein B homolog Vibrio cholerae serotype O1 (strain M66-2)
Q9KVR0 2.21e-19 79 37 0 96 3 uspB Universal stress protein B homolog Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
A5F4E9 2.21e-19 79 37 0 96 3 uspB Universal stress protein B homolog Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395)
Q7MQD2 8.14e-19 77 31 0 101 3 uspB Universal stress protein B homolog Vibrio vulnificus (strain YJ016)
Q8DD90 8.14e-19 77 31 0 101 3 uspB Universal stress protein B homolog Vibrio vulnificus (strain CMCP6)

  • Number of RefSeq hits:

General

Source Morganella morganii S3
Locus tag LHKJJB_14845
Feature type CDS
Gene uspB
Product universal stress protein UspB
Location 119995 - 120330 (strand: -1)
Length 336 (nucleotides) / 111 (amino acids)

Contig

Accession ZDB_372
Length 141725 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1584
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF10625 Universal stress protein B (UspB)

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K06144 universal stress protein B - -

Protein Sequence

MFSILTLFWALCFLCLINMIRFYSSTRALLSVLRDSDPLLYHAVGGNNAFTDHTQWQKQLRLIRYINQREYLTHHDPEVILRCERIRRQFTMISAICGIVIASLLMMIIWP

Flanking regions ( +/- flanking 50bp)

GACACTGATATCACCGGTTCCTTCTCCGCAGATAGTCTAAGGAGTGGATTATGTTCAGTATACTTACACTGTTCTGGGCGTTATGTTTTCTTTGTCTGATTAACATGATCCGGTTTTATTCATCCACCCGGGCATTACTCTCCGTCCTGCGTGACAGCGACCCGCTGCTCTACCACGCTGTCGGCGGCAATAATGCGTTTACTGACCACACCCAGTGGCAGAAGCAGCTGCGCCTTATCCGCTATATCAATCAGCGGGAATATCTCACTCATCATGACCCTGAAGTGATTTTACGCTGCGAACGTATCCGCCGTCAGTTCACCATGATCAGTGCGATATGCGGAATTGTGATTGCCTCTCTGCTGATGATGATTATCTGGCCGTAACCGGTTACCGGATGCAAAAAAAAGCCTGACACACGTGTCAGGCTTTTCTG