Homologs in group_333

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7 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_10425 FBDBKF_10425 100.0 Morganella morganii S1 dam adenine-specific DNA-methyltransferase
EHELCC_14760 EHELCC_14760 100.0 Morganella morganii S2 dam adenine-specific DNA-methyltransferase
NLDBIP_14590 NLDBIP_14590 100.0 Morganella morganii S4 dam adenine-specific DNA-methyltransferase
HKOGLL_13375 HKOGLL_13375 100.0 Morganella morganii S5 dam adenine-specific DNA-methyltransferase
F4V73_RS14120 F4V73_RS14120 89.0 Morganella psychrotolerans dam adenine-specific DNA-methyltransferase
PMI_RS09860 PMI_RS09860 41.1 Proteus mirabilis HI4320 - Dam family site-specific DNA-(adenine-N6)-methyltransferase
PMI_RS14985 PMI_RS14985 71.1 Proteus mirabilis HI4320 dam adenine-specific DNA-methyltransferase

Distribution of the homologs in the orthogroup group_333

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_333

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P45454 1.29e-146 414 70 0 270 3 dam DNA adenine methylase Serratia marcescens
P0DMP3 8.95e-137 390 68 1 270 3 dam DNA adenine methylase Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A292 8.95e-137 390 68 1 270 3 dam DNA adenine methylase Salmonella typhi
P0AEE8 1.07e-136 389 67 1 270 1 dam DNA adenine methylase Escherichia coli (strain K12)
P0AEE9 1.07e-136 389 67 1 270 3 dam DNA adenine methylase Escherichia coli O157:H7
P0DMP4 1.49e-135 387 67 1 270 1 dam DNA adenine methylase Salmonella typhimurium
P0C6Q8 1.86e-116 338 59 0 269 3 dam DNA adenine methylase Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
A5F520 1.86e-116 338 59 0 269 3 dam DNA adenine methylase Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395)
P44431 7.59e-100 296 53 3 272 3 dam DNA adenine methylase Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P21311 3.2e-78 241 44 4 264 3 dam Retron Ec67 DNA adenine methylase Escherichia coli
Q71TL0 3.78e-61 209 39 4 268 1 dmt DNA N-6-adenine-methyltransferase Escherichia phage P1
P34720 1.45e-43 152 34 9 290 3 mboIAM Type II methyltransferase M1.MboI Moraxella bovis
Q58015 3.27e-40 144 32 10 285 3 mjaIIIM Type II methyltransferase M.MjaIII Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
P50179 6.35e-40 143 32 6 276 3 llaDCHIA Type II methyltransferase M1.LlaDCHI Lactococcus lactis subsp. cremoris
P04043 1.02e-37 137 32 6 275 1 dpnM Type II methyltransferase M1.DpnII Streptococcus pneumoniae
O33844 3.68e-34 128 32 9 298 3 dam DNA adenine methylase Treponema pallidum (strain Nichols)
P04393 2.24e-22 97 34 8 196 1 ecoRVM Type II methyltransferase M.EcoRV Escherichia coli
Q01511 8.11e-21 92 29 11 242 3 CVIBIM Type II methyltransferase M.CviBI Paramecium bursaria Chlorella virus NC1A
P12427 9.69e-13 69 25 8 239 3 DAM DNA adenine methylase Enterobacteria phage T2
P04392 3.19e-12 68 27 5 180 1 DAM DNA adenine methylase Enterobacteria phage T4
P14871 3.98e-12 69 28 8 187 1 fokIM Type II methyltransferase M.FokI Planomicrobium okeanokoites
P29347 9.93e-10 62 25 9 204 3 stsIM Modification methylase StsI Streptococcus sanguinis

  • Number of RefSeq hits:

General

Source Morganella morganii S3
Locus tag LHKJJB_14755
Feature type CDS
Gene dam
Product adenine-specific DNA-methyltransferase
Location 99577 - 100410 (strand: -1)
Length 834 (nucleotides) / 277 (amino acids)

Contig

Accession ZDB_372
Length 141725 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_333
Orthogroup size 8
N. genomes 7

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Genomic region

Domains

PF02086 D12 class N6 adenine-specific DNA methyltransferase

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0338 Replication, recombination and repair (L) L DNA-adenine methylase

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K06223 DNA adenine methylase [EC:2.1.1.72] Mismatch repair -

Protein Sequence

MITDSMKKQRAFLKWAGGKYTLADEIKRHLPEGDCLIEPFVGAGSVFLNTDYPRYVLADINSDLIHLYTMVKQRTQEFIDESRKLFTPQFNDELQYYALREQFNQSTDHFERSILFLYLNRHCYNGLCRYNSKGRFNVPFGRYRKPYFPEAELLWFAEKARNAVFVCQSYVTSMENAGTGDIVYCDPPYAPLSLTANFTAYHTSGFGLPEQQNLAQLAQMLSSDRKIPVLISNHDTPLTREWYHQAQLHIVKVRRTISRNTLNRQKVNELLALYRGQ

Flanking regions ( +/- flanking 50bp)

ATTTGCTGTCTGAAACAGAGCAGAATCGGCGGCTCTGGCCTTTTTGAGCAATGATTACAGACAGCATGAAGAAACAACGCGCATTTTTGAAGTGGGCCGGCGGAAAATACACTCTGGCAGATGAAATAAAACGGCATCTGCCGGAGGGTGATTGCCTTATTGAGCCCTTTGTCGGCGCGGGGTCGGTTTTTCTCAATACAGATTATCCGCGCTATGTGCTGGCGGATATCAACAGTGATCTGATCCACCTCTATACGATGGTGAAACAGCGGACTCAGGAATTTATCGATGAGTCCCGCAAGCTGTTCACGCCGCAGTTTAATGATGAATTACAGTACTATGCGCTGCGGGAACAATTTAATCAGAGCACGGATCATTTCGAGCGCAGCATTCTGTTTCTCTATCTGAACCGCCATTGTTATAACGGTTTGTGCCGTTATAATTCCAAAGGCCGGTTTAATGTGCCCTTCGGGCGCTACCGCAAACCCTATTTCCCGGAAGCTGAACTGCTGTGGTTCGCGGAAAAAGCCCGTAACGCCGTGTTTGTCTGCCAGTCTTATGTGACCAGCATGGAAAATGCAGGCACCGGGGATATCGTCTATTGTGATCCGCCTTATGCGCCGTTATCACTGACAGCCAATTTTACGGCGTATCACACCAGCGGATTCGGGTTACCGGAGCAGCAGAATCTGGCACAGCTGGCACAAATGCTTTCGTCGGATCGCAAAATTCCGGTTCTGATCTCGAATCATGACACCCCGCTGACCCGGGAGTGGTATCATCAGGCGCAACTGCATATTGTCAAAGTGCGCCGCACTATCAGCCGCAACACACTTAACCGCCAGAAAGTGAATGAATTACTGGCGCTTTACCGCGGACAGTAAGCCGTTGAACCCGGCGGCGTCTTATTAAGAGGAAACAGGAATGAAAGAGT