COG0338


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG0338, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 8 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description DNA-adenine methylase
Function(s) descr. Replication, recombination and repair (L)

Occurence in the database

COG0338 is associated with 8 different proteins (see tab "Protein list" and "Profile")
The 8 proteins are classified into 1 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_333 FBDBKF_10425 41326 42159 1 dam adenine-specific DNA-methyltransferase Morganella morganii S1
1 group_333 EHELCC_14760 41316 42149 1 dam adenine-specific DNA-methyltransferase Morganella morganii S2
2 group_333 NLDBIP_14590 41316 42149 1 dam adenine-specific DNA-methyltransferase Morganella morganii S4
3 group_333 LHKJJB_14755 99577 100410 -1 dam adenine-specific DNA-methyltransferase Morganella morganii S3
4 group_333 HKOGLL_13375 99577 100410 -1 dam adenine-specific DNA-methyltransferase Morganella morganii S5
5 group_333 F4V73_RS14120 38075 38893 1 dam adenine-specific DNA-methyltransferase Morganella psychrotolerans
6 group_333 PMI_RS09860 2143187 2144011 -1 Dam family site-specific DNA-(adenine-N6)-methyltransferase Proteus mirabilis HI4320
7 group_333 PMI_RS14985 3326156 3326971 1 dam adenine-specific DNA-methyltransferase Proteus mirabilis HI4320