Homologs in group_2687

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_05265 FBDBKF_05265 100.0 Morganella morganii S1 alpA DNA-binding transcriptional regulator AlpA
EHELCC_12325 EHELCC_12325 100.0 Morganella morganii S2 alpA DNA-binding transcriptional regulator AlpA
NLDBIP_12665 NLDBIP_12665 100.0 Morganella morganii S4 alpA DNA-binding transcriptional regulator AlpA
HKOGLL_11140 HKOGLL_11140 100.0 Morganella morganii S5 alpA DNA-binding transcriptional regulator AlpA
F4V73_RS05720 F4V73_RS05720 87.0 Morganella psychrotolerans - DNA-binding protein

Distribution of the homologs in the orthogroup group_2687

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2687

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella morganii S3
Locus tag LHKJJB_12525
Feature type CDS
Gene alpA
Product DNA-binding transcriptional regulator AlpA
Location 122227 - 122784 (strand: 1)
Length 558 (nucleotides) / 185 (amino acids)

Contig

Accession ZDB_369
Length 181491 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2687
Orthogroup size 6
N. genomes 6

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Genomic region

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3311 Transcription (K)
Mobilome: prophages, transposons (X)		 KX DNA-binding transcriptional regulator AlpA

Protein Sequence

MALYNFTLTLSGVTADTENLEDALFAGGCDDALLCFYGKSVYLEFDREAPSLDCAIRTAVEDVESAGVNARVESVDSALVGLSDIAELTGMSRQAIALLKDGARGPGTFPGPVQRLRGQSPLWDWAAVASWLMAQGRLAAHSEMAENAKIISKWNLALRAGAAEDPAEIDIITRSLIARREKCRC

Flanking regions ( +/- flanking 50bp)

GAAAAGTGGATGCCTGTCAGTGAAAACGGGCAGCAGGAAAGGGGGAAACGATGGCACTGTATAATTTTACGCTGACGCTGTCCGGTGTGACAGCAGATACAGAGAACCTGGAGGATGCCTTATTTGCAGGCGGTTGTGATGATGCATTACTCTGTTTTTACGGTAAATCAGTCTATCTGGAATTTGACCGGGAAGCACCGTCTCTGGATTGTGCAATCCGTACGGCGGTGGAAGACGTGGAATCAGCCGGTGTGAATGCACGGGTGGAATCGGTGGATTCTGCTCTTGTCGGCCTGAGTGATATTGCGGAACTGACTGGTATGTCACGTCAGGCAATCGCGTTGCTCAAAGATGGTGCGCGCGGCCCGGGCACCTTTCCGGGGCCGGTGCAGCGGCTGCGCGGGCAATCCCCGTTATGGGACTGGGCTGCGGTCGCGTCCTGGCTGATGGCACAAGGGCGGCTGGCTGCACATTCTGAGATGGCAGAAAATGCAAAAATTATCAGCAAATGGAATCTTGCATTACGGGCGGGGGCTGCAGAGGATCCCGCTGAAATTGACATTATCACAAGGTCATTAATCGCCCGGCGTGAAAAATGCCGCTGCTGACCGCGTGACCGGCGGGGAGATTATTCCCGCCAGCGGACAGCGTATTCTGG