Homologs in group_2829

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_09365 FBDBKF_09365 100.0 Morganella morganii S1 - EscE/YscE/SsaE family type III secretion system needle protein co-chaperone
EHELCC_10045 EHELCC_10045 100.0 Morganella morganii S2 - EscE/YscE/SsaE family type III secretion system needle protein co-chaperone
NLDBIP_10390 NLDBIP_10390 100.0 Morganella morganii S4 - EscE/YscE/SsaE family type III secretion system needle protein co-chaperone
HKOGLL_14025 HKOGLL_14025 100.0 Morganella morganii S5 - EscE/YscE/SsaE family type III secretion system needle protein co-chaperone
F4V73_RS10600 F4V73_RS10600 53.1 Morganella psychrotolerans - hypothetical protein

Distribution of the homologs in the orthogroup group_2829

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2829

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella morganii S3
Locus tag LHKJJB_10965
Feature type CDS
Gene -
Product EscE/YscE/SsaE family type III secretion system needle protein co-chaperone
Location 171992 - 172255 (strand: 1)
Length 264 (nucleotides) / 87 (amino acids)
In genomic island -

Contig

Accession ZDB_367
Length 191445 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2829
Orthogroup size 6
N. genomes 6

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Genomic region

Protein Sequence

MPDIANKNDAITFTTLLKQFKSPIHEDNVKLNTLMNNLQSGNKDTANAYDMAMLQACSSSLNIKCSALSAMIRQHKENLSTPIGNMR

Flanking regions ( +/- flanking 50bp)

TGTCTGATAGTCATACACAATTCACCTCTGACTAATAAATAAGGATATTTATGCCTGATATAGCAAATAAAAATGATGCAATAACATTTACCACCCTGCTAAAACAATTCAAATCACCGATTCATGAAGATAATGTGAAACTGAATACGCTGATGAATAATTTACAGTCTGGCAATAAAGACACGGCCAATGCCTACGATATGGCAATGCTGCAGGCCTGTTCCTCATCGCTGAATATAAAGTGCTCGGCACTTTCAGCAATGATCCGCCAGCATAAAGAAAACCTCTCAACACCAATCGGCAATATGCGCTGATTTATGACGTAAAAATGGCAGGTTACCCGCCTGCCATTAACCATAACAAG