Homologs in group_2808

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_09365 FBDBKF_09365 53.1 Morganella morganii S1 - EscE/YscE/SsaE family type III secretion system needle protein co-chaperone
EHELCC_10045 EHELCC_10045 53.1 Morganella morganii S2 - EscE/YscE/SsaE family type III secretion system needle protein co-chaperone
NLDBIP_10390 NLDBIP_10390 53.1 Morganella morganii S4 - EscE/YscE/SsaE family type III secretion system needle protein co-chaperone
LHKJJB_10965 LHKJJB_10965 53.1 Morganella morganii S3 - EscE/YscE/SsaE family type III secretion system needle protein co-chaperone
HKOGLL_14025 HKOGLL_14025 53.1 Morganella morganii S5 - EscE/YscE/SsaE family type III secretion system needle protein co-chaperone

Distribution of the homologs in the orthogroup group_2808

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2808

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS10600
Feature type CDS
Gene -
Product hypothetical protein
Location 250069 - 250314 (strand: -1)
Length 246 (nucleotides) / 81 (amino acids)

Contig

Accession term accessions NZ_VXKB01000002 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 573139 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2808
Orthogroup size 6
N. genomes 6

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Genomic region

Protein Sequence

MADVVNTGFSFEEIPAHFEANIKSDNTKLLALMGKVKTGSTAYDMAQLQTTSSSLSMKLSALSAIVRQHKENMSTPLGNMR

Flanking regions ( +/- flanking 50bp)

TATCTGGAGATCATATTGATTTTACCCTCCATAATAAATAAGGAAATTTTATGGCTGATGTTGTAAATACAGGATTTTCATTCGAAGAGATCCCGGCACACTTTGAGGCGAATATCAAAAGTGACAATACTAAATTGCTCGCATTAATGGGTAAGGTTAAAACCGGTTCTACTGCCTATGACATGGCACAATTACAAACAACATCCAGTTCATTAAGCATGAAGCTGTCAGCACTCTCTGCTATCGTGCGTCAGCACAAAGAGAATATGAGTACACCACTCGGTAATATGCGCTGATAACCACCACACGAACCTGCAATTAATTCTGATAAGAAAGCGGTACTACC