Homologs in group_3127

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_20030 FBDBKF_20030 100.0 Morganella morganii S1 sfmH Fimbriae-like adhesin SfmH
EHELCC_03500 EHELCC_03500 100.0 Morganella morganii S2 sfmH Fimbriae-like adhesin SfmH
NLDBIP_03500 NLDBIP_03500 100.0 Morganella morganii S4 sfmH Fimbriae-like adhesin SfmH
HKOGLL_09645 HKOGLL_09645 100.0 Morganella morganii S5 sfmH Fimbriae-like adhesin SfmH
PMI_RS07090 PMI_RS07090 43.1 Proteus mirabilis HI4320 - fimbrial protein

Distribution of the homologs in the orthogroup group_3127

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3127

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P37925 1.57e-40 147 45 2 159 3 fimH Type 1 fimbrin D-mannose specific adhesin Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P75715 7.26e-37 137 45 1 142 2 sfmH Uncharacterized fimbrial-like protein SfmH Escherichia coli (strain K12)
P75858 3.62e-13 72 31 4 161 2 elfG Uncharacterized fimbrial-like protein ElfG Escherichia coli (strain K12)
P43663 4.55e-12 69 31 3 154 3 lpfD Protein LpfD Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q8X5K9 9.17e-12 68 35 4 145 2 lpfD Probable minor fimbrial subunit LpfD Escherichia coli O157:H7
Q8XDC9 7.14e-05 47 30 3 113 2 elfG Uncharacterized fimbrial-like protein ElfG Escherichia coli O157:H7

  • Number of RefSeq hits:

General

Source Morganella morganii S3
Locus tag LHKJJB_09330
Feature type CDS
Gene sfmH
Product Fimbriae-like adhesin SfmH
Location 8074 - 9072 (strand: -1)
Length 999 (nucleotides) / 332 (amino acids)

Contig

Accession ZDB_366
Length 191897 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3127
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF00419 Fimbrial protein

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3539 Cell motility (N) N Pilin (type 1 fimbrial protein)

Protein Sequence

MRNIILSGLLLVCANSYAVTCTSGCNDVYLKIEQNLASNDNDTGAQINSNAITTPGLGMKATHNGYLMQWAKFNGDPIPAPPSHATNWQFKKVDDYISVALSRDSPCIGNTGTIYVPFNERVYGPGCVARVHQTGDDLSITPRDWQSRLRIDRKIVSGTYSKNILIGQFGFCEPDNCTSPQVVQNVYLSLNITVPQTCSINAGQTVIVDFGNISTGAFKTAGARAQNINPKESTLSVTCDNIASGTNLNMRLQANNVAGNIVISDNSDVGFIVTDSSDKELTPNSLSSFIPFSLDGNTRANARIRVYPASVTGIRPDEGPVTSQAYLRIDFP

Flanking regions ( +/- flanking 50bp)

TATCAGTGCCCGCTGTTTATAACACGAATCAGGTAAAGTGAGTTTTAATTATGCGTAATATTATATTATCAGGTTTACTTCTGGTTTGTGCAAACAGCTATGCGGTAACCTGTACTTCCGGATGTAATGATGTCTATCTTAAGATAGAGCAAAATCTGGCATCAAATGACAATGATACCGGTGCTCAGATAAACAGTAATGCGATTACCACACCGGGATTAGGAATGAAAGCAACGCACAATGGTTATCTTATGCAATGGGCGAAATTTAATGGTGATCCGATTCCGGCACCGCCCTCTCATGCAACCAACTGGCAGTTTAAAAAGGTGGATGACTATATTTCAGTGGCATTATCCCGTGATAGTCCCTGTATCGGTAATACCGGAACGATTTATGTTCCGTTTAATGAGAGAGTTTATGGTCCCGGTTGCGTGGCCCGTGTTCATCAGACCGGGGATGATTTATCAATAACCCCCCGTGACTGGCAGAGCCGGCTTCGTATAGACAGAAAAATTGTCAGCGGTACCTATTCAAAAAATATCCTGATTGGGCAGTTTGGTTTTTGTGAACCGGATAATTGTACTTCTCCACAGGTGGTACAAAATGTGTATTTATCCCTGAATATTACGGTTCCGCAGACATGCTCCATTAATGCCGGACAAACAGTAATTGTGGATTTCGGGAATATATCAACCGGCGCATTTAAAACGGCAGGTGCCAGAGCACAGAATATTAATCCGAAGGAAAGTACCTTATCGGTGACCTGCGATAATATTGCCTCAGGAACAAACCTGAATATGCGTTTACAGGCCAATAACGTTGCGGGAAATATTGTGATTTCCGATAACAGTGATGTCGGATTTATTGTTACTGACAGCAGTGATAAAGAACTGACACCCAACAGTCTGTCGAGTTTTATTCCGTTTTCTCTCGACGGAAATACGCGGGCTAATGCACGGATCCGTGTTTATCCGGCCAGCGTGACCGGCATCAGACCTGATGAAGGTCCGGTAACATCACAGGCTTACTTACGGATTGATTTCCCGTAACTCTCCGGAGGAGACCGGTAATGAATAGTATTAACAGTAAATTTTCCGGA