Homologs in group_2442

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_19980 FBDBKF_19980 100.0 Morganella morganii S1 ydcH DUF465 domain-containing protein
EHELCC_07635 EHELCC_07635 100.0 Morganella morganii S2 ydcH DUF465 domain-containing protein
NLDBIP_07960 NLDBIP_07960 100.0 Morganella morganii S4 ydcH DUF465 domain-containing protein
HKOGLL_19160 HKOGLL_19160 100.0 Morganella morganii S5 ydcH DUF465 domain-containing protein
F4V73_RS02390 F4V73_RS02390 86.3 Morganella psychrotolerans - DUF465 domain-containing protein
PMI_RS04810 PMI_RS04810 74.0 Proteus mirabilis HI4320 - DUF465 domain-containing protein

Distribution of the homologs in the orthogroup group_2442

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2442

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0ACW7 2.2e-23 87 62 0 67 4 ydcH Uncharacterized protein YdcH Shigella flexneri
P0ACW6 2.2e-23 87 62 0 67 4 ydcH Uncharacterized protein YdcH Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Morganella morganii S3
Locus tag LHKJJB_06305
Feature type CDS
Gene ydcH
Product DUF465 domain-containing protein
Location 254775 - 254996 (strand: -1)
Length 222 (nucleotides) / 73 (amino acids)

Contig

Accession ZDB_362
Length 257361 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2442
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF04325 Protein of unknown function (DUF465)

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2841 Function unknown (S) S Uncharacterized conserved protein YdcH, DUF465 family

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K09794 uncharacterized protein - -

Protein Sequence

MFPEYRDLISHLRQNSHQFRTLFDKHNQLDHEIARLEKSDRSGYSEEVVELKKQKLRLKEEIHQLLKDPPEDD

Flanking regions ( +/- flanking 50bp)

CTGAAATCGCAGATGATGGCACTATAGTCACTGACAGGAGGTAAGTTGTTATGTTTCCGGAATACCGTGATTTGATCTCCCATCTTCGCCAAAATAGTCATCAGTTTCGCACGCTGTTTGATAAACACAATCAACTCGATCATGAAATTGCCCGTCTGGAAAAATCAGACAGAAGCGGCTACAGTGAGGAAGTGGTGGAACTGAAAAAACAGAAATTACGCCTGAAAGAAGAAATCCACCAGCTTCTTAAAGATCCGCCGGAAGATGACTGAATTTCCTTAATATGCCATCGGTTAATCCGGTGGCTTTTTGTTTACGGGGA